Jatropha Genome Database

JcCA0289411.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0289411.10 - phase: 0 
         (1644 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522455|gb|FM894600.1|FM894600 FM894600 Jatropha curcas emb...   926   0.0  

>gi|268522455|gb|FM894600.1|FM894600 FM894600 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000393,
            mRNA sequence
          Length = 556

 Score =  926 bits (467), Expect = 0.0
 Identities = 467/467 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1178 tccatcctccatctgaagaatggcacaggcgaaatatgtttggtggcccctggtctgatt 1237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556  tccatcctccatctgaagaatggcacaggcgaaatatgtttggtggcccctggtctgatt 497

                                                                        
Query: 1238 tagaggatacgagttctgctgatgatactcctaggcagagtagctacacagattcccttg 1297
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496  tagaggatacgagttctgctgatgatactcctaggcagagtagctacacagattcccttg 437

                                                                        
Query: 1298 atttcagctcgttggaaaattgtgatgtgtattgtggtgtcaatggcctatggccaaaga 1357
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436  atttcagctcgttggaaaattgtgatgtgtattgtggtgtcaatggcctatggccaaaga 377

                                                                        
Query: 1358 agcgcagaatgtctgaaagagatgcagcttttggcttgaatacctctgttggcctgggag 1417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376  agcgcagaatgtctgaaagagatgcagcttttggcttgaatacctctgttggcctgggag 317

                                                                        
Query: 1418 cataccttgggattatgggatctcgaagagatgttgttactgcagtgtggaagactggtc 1477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316  cataccttgggattatgggatctcgaagagatgttgttactgcagtgtggaagactggtc 257

                                                                        
Query: 1478 ttgaaggggtttggtacaagtgcataagatgtctccggcagacttcagcttttgcttccc 1537
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256  ttgaaggggtttggtacaagtgcataagatgtctccggcagacttcagcttttgcttccc 197

                                                                        
Query: 1538 caggggctacaagtccaccgaatcaaaatgagcgggaggcatggtggatcagtcgttggg 1597
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196  caggggctacaagtccaccgaatcaaaatgagcgggaggcatggtggatcagtcgttggg 137

                                                           
Query: 1598 cctatggctgtcctatgtgcggtggaacgtgggttcgagttgtatag 1644
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136  cctatggctgtcctatgtgcggtggaacgtgggttcgagttgtatag 90