Jatropha Genome Database

JcCA0286251.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0286251.20 - phase: 0 
         (483 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091087|gb|GT228514.1|GT228514 JC079 Jatropha seeds from fr...   733   0.0  

>gi|262091087|gb|GT228514.1|GT228514 JC079 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone Contig80 5', mRNA sequence
          Length = 624

 Score =  733 bits (370), Expect = 0.0
 Identities = 370/370 (100%)
 Strand = Plus / Plus

                                                                       
Query: 114 gactgaagaagatgtaaagggaagcagcatgacccttagggcaaaagattcaacagcaga 173
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  gactgaagaagatgtaaagggaagcagcatgacccttagggcaaaagattcaacagcaga 102

                                                                       
Query: 174 aggtttctcttttgatttttctgccataaagccaggtattgcatcagacttgaaatttgg 233
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 aggtttctcttttgatttttctgccataaagccaggtattgcatcagacttgaaatttgg 162

                                                                       
Query: 234 gggttgtggttcctatccaaatttaccatgggtttcaaccacaggttctggcccaaacgg 293
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gggttgtggttcctatccaaatttaccatgggtttcaaccacaggttctggcccaaacgg 222

                                                                       
Query: 294 cagaacaatttctggtgtaacgtatagatacagtgcaaatcaaataagaatcgtgtgtgc 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cagaacaatttctggtgtaacgtatagatacagtgcaaatcaaataagaatcgtgtgtgc 282

                                                                       
Query: 354 ttgccacggttcccatatgtcccctgaggaatttgttaggcatgctaatgaagagaatgc 413
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttgccacggttcccatatgtcccctgaggaatttgttaggcatgctaatgaagagaatgc 342

                                                                       
Query: 414 taatgcagaaaatggcagtggtttagcctcatttccaagcactaaccctgctgcctccgc 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 taatgcagaaaatggcagtggtttagcctcatttccaagcactaaccctgctgcctccgc 402

                     
Query: 474 tcagagctaa 483
           ||||||||||
Sbjct: 403 tcagagctaa 412