Jatropha Genome Database

JcCA0286161.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0286161.30 - phase: 0 /partial
         (628 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522314|gb|FM894459.1|FM894459 FM894459 Jatropha curcas emb...   345   4e-95

>gi|268522314|gb|FM894459.1|FM894459 FM894459 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000129,
           mRNA sequence
          Length = 425

 Score =  345 bits (174), Expect = 4e-95
 Identities = 180/182 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagttaaagcaagagctccaggaaaaatcattctttccggtgaacacgctgtggtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 244 atggaagttaaagcaagagctccaggaaaaatcattctttccggtgaacacgcagtggtg 303

                                                                       
Query: 61  cacggatcgactgcagtcgcttcatccattaatctctacacctatgtcaccctctctttt 120
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 304 cacggatcgactgcagtcgcttcatccattaatctctacaccaatgtcaccctctctttt 363

                                                                       
Query: 121 cccacttctgagaatgatggtacactgaaactccagctcaaggatatggcactagaattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cccacttctgagaatgatggtacactgaaactccagctcaaggatatggcactagaattt 423

             
Query: 181 tc 182
           ||
Sbjct: 424 tc 425