Jatropha Genome Database

JcCA0285211.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0285211.10 + phase: 0 
         (351 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237679849|gb|GO247154.1|GO247154 JcrME_RL0698 Expressed seque...   688   0.0  

>gi|237679849|gb|GO247154.1|GO247154 JcrME_RL0698 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 632

 Score =  688 bits (347), Expect = 0.0
 Identities = 347/347 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccgatcgagacagaggagactgggaattctatctccgaactctgtccagtagcgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atggccgatcgagacagaggagactgggaattctatctccgaactctgtccagtagcgcc 177

                                                                       
Query: 61  agggattccaatttggccagtgaccctgcctctgatccttctcttctccaatctattaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 agggattccaatttggccagtgaccctgcctctgatccttctcttctccaatctattaaa 237

                                                                       
Query: 121 agattatacgagttgtgtaagcaagagaattctgaggatttggtggctagggtttatcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agattatacgagttgtgtaagcaagagaattctgaggatttggtggctagggtttatcct 297

                                                                       
Query: 181 caaattaataggctatttcaacgctctgttaattcgcttgctcaatctaagtcctcttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 caaattaataggctatttcaacgctctgttaattcgcttgctcaatctaagtcctcttat 357

                                                                       
Query: 241 ggacttctcttactggccattcttcaattttttcttgattttggtgaggtggttcttcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggacttctcttactggccattcttcaattttttcttgattttggtgaggtggttcttcat 417

                                                          
Query: 301 gatgctgatcccagtctaaagacgtttttccgttcatgtttgagccg 347
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gatgctgatcccagtctaaagacgtttttccgttcatgtttgagccg 464