Jatropha Genome Database
- JcCA0279561.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0279561.20 - phase: 2 /partial
(601 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268524302|gb|FM894982.1|FM894982 FM894982 Jatropha curcas emb... 291 5e-79
gi|218686978|gb|GH295946.1|GH295946 JCL395 Jatropha curcas total... 90 3e-18
gi|218687505|gb|GH295552.1|GH295552 JCL1 Jatropha curcas total l... 90 3e-18
>gi|268524302|gb|FM894982.1|FM894982 FM894982 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001301,
mRNA sequence
Length = 615
Score = 291 bits (147), Expect = 5e-79
Identities = 195/211 (92%)
Strand = Plus / Minus
Query: 387 ttggagttgctggttcacctaagtttaagctctatgatatagattttgggtggaggaggc 446
||||||||||||||||||||||||| ||||| || |||||||||||||| ||| ||||||
Sbjct: 443 ttggagttgctggttcacctaagttcaagctttacgatatagattttggatgggggaggc 384
Query: 447 caaaaaaggtggagatagtatctatagatcgaaatggagcaatttctatggtagagagca 506
||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 383 caaaaaaggtggagatagtatctatagatcgaagtggtgtaatttctatggtagagagca 324
Query: 507 aagatgagagtggtggtgttgagattggcttagtcttgaagaagcatgaaatggaaatgt 566
||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||| | ||
Sbjct: 323 aagatgaaagtggtggtgttgagattggcttagttttgcagaagtatgaaatggagacgt 264
Query: 567 ttaactctctatttgttaatggcattttaga 597
|| | ||||||||||||||||||||||||||
Sbjct: 263 ttgattctctatttgttaatggcattttaga 233
>gi|218686978|gb|GH295946.1|GH295946 JCL395 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 735
Score = 89.7 bits (45), Expect = 3e-18
Identities = 111/133 (83%)
Strand = Plus / Minus
Query: 466 atctatagatcgaaatggagcaatttctatggtagagagcaaagatgagagtggtggtgt 525
||||||||||| | ||||| ||||||||| ||||||||||||| ||||||||| |
Sbjct: 523 atctatagatctgagtggaggcatttctatgtccgagagcaaagatgggagtggtggcat 464
Query: 526 tgagattggcttagtcttgaagaagcatgaaatggaaatgtttaactctctatttgttaa 585
|||| |||| ||||| |||||| | ||||||||||| |||| || ||||||||||||||
Sbjct: 463 tgaggttggtttagttttgaagcaacatgaaatggagttgttcaattctctatttgttaa 404
Query: 586 tggcattttagac 598
|||| || |||||
Sbjct: 403 tggccttctagac 391
>gi|218687505|gb|GH295552.1|GH295552 JCL1 Jatropha curcas total leaf
library Jatropha curcas cDNA, mRNA sequence
Length = 735
Score = 89.7 bits (45), Expect = 3e-18
Identities = 111/133 (83%)
Strand = Plus / Minus
Query: 466 atctatagatcgaaatggagcaatttctatggtagagagcaaagatgagagtggtggtgt 525
||||||||||| | ||||| ||||||||| ||||||||||||| ||||||||| |
Sbjct: 523 atctatagatctgagtggaggcatttctatgtccgagagcaaagatgggagtggtggcat 464
Query: 526 tgagattggcttagtcttgaagaagcatgaaatggaaatgtttaactctctatttgttaa 585
|||| |||| ||||| |||||| | ||||||||||| |||| || ||||||||||||||
Sbjct: 463 tgaggttggtttagttttgaagcaacatgaaatggagttgttcaattctctatttgttaa 404
Query: 586 tggcattttagac 598
|||| || |||||
Sbjct: 403 tggccttctagac 391