Jatropha Genome Database

JcCA0274161.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0274161.10 + phase: 0 
         (1464 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680795|gb|GO247007.1|GO247007 JcrME_RL0551 Expressed seque...    50   7e-06

>gi|237680795|gb|GO247007.1|GO247007 JcrME_RL0551 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 700

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 44  tcccctatccagctcaaggacatgtaaacccaatgtttaagctagcaaaactcctccact 103
           |||| |||||||||||||| ||| ||||||| ||| | || ||||| ||||| |||||  
Sbjct: 105 tcccatatccagctcaaggccatataaaccctatgctaaaactagccaaacttctccatc 164

                                    
Query: 104 tcaatggcttccacataaccttcgt 128
            ||| |||||||| || ||||||||
Sbjct: 165 acaaaggcttccatattaccttcgt 189