Jatropha Genome Database

JcCA0273941.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0273941.10 - phase: 0 /partial
         (575 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522021|gb|FM892861.1|FM892861 FM892861 Jatropha curcas emb...   622   e-178

>gi|268522021|gb|FM892861.1|FM892861 FM892861 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003531,
           mRNA sequence
          Length = 406

 Score =  622 bits (314), Expect = e-178
 Identities = 314/314 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagatcacagagaagaaggaaacagaaaacaacaatatcaatgctcaaacagcagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  atggagatcacagagaagaaggaaacagaaaacaacaatatcaatgctcaaacagcagtg 152

                                                                       
Query: 61  gattcaacaccaactgacatcatagataaagaagccgaagaacgccaagcacgcgacctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gattcaacaccaactgacatcatagataaagaagccgaagaacgccaagcacgcgacctt 212

                                                                       
Query: 121 aaagctggtttgcatcctctcaagcacaagtttgtattttggtacactcgccgaacacca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aaagctggtttgcatcctctcaagcacaagtttgtattttggtacactcgccgaacacca 272

                                                                       
Query: 181 ggagttcgaacacagacatcatatgaggacaacataaagaaaatcgtggagttcagtaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggagttcgaacacagacatcatatgaggacaacataaagaaaatcgtggagttcagtaca 332

                                                                       
Query: 241 gttgaaggcttttgggtctgctattgccacttggctcgaccttcttctttacccagtccc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gttgaaggcttttgggtctgctattgccacttggctcgaccttcttctttacccagtccc 392

                         
Query: 301 actgatctgcatct 314
           ||||||||||||||
Sbjct: 393 actgatctgcatct 406