Jatropha Genome Database
- JcCA0270791.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0270791.10 + phase: 0 /partial
(564 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237680923|gb|GO247114.1|GO247114 JcrME_RL0658 Expressed seque... 1078 0.0
gi|268518187|gb|FM888461.1|FM888461 FM888461 Jatropha curcas emb... 377 e-105
>gi|237680923|gb|GO247114.1|GO247114 JcrME_RL0658 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 647
Score = 1078 bits (544), Expect = 0.0
Identities = 561/564 (99%), Gaps = 2/564 (0%)
Strand = Plus / Plus
Query: 1 atggctttgggttcaattttgcaatcacagacctctctagatggggaccctcgagagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 atggctttgggttcaattttgcaatcacagacctctctagatggggaccctcgagagcat 94
Query: 61 ttatttactgtggacgattttgaatcggatatcggcggttctcaaatcaagttccggata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ttatttactgtggacgattttgaatcggatatcggcggttctcaaatcaagttccggata 154
Query: 121 aagaatttgataaagaaatcggatgctggagtaactattcttaacggaattaatttggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagaatttgataaagaaatcggatgctggagtaactattcttaacggaattaatttggat 214
Query: 181 atacctaaaggagttattgttggaatcattggccctagtggtagcggcaaatctacgctt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 215 atacctaaaggagttattgttggaatcagtggccctagtggtagcggcaaatctacgctt 274
Query: 241 ttgaggtcgcttaaccgcctatgggaacctccgtctggtaccgtgtttctcgacggccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttgaggtcgcttaaccgcctatgggaacctccgtctggtaccgtgtttctcgacggccgt 334
Query: 301 gatatccgggatcttgatgttcttggcctccgccgtagggttggcatgctcttccaggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gatatccgggatcttgatgttcttggcctccgccgtagggttggcatgctcttccaggtt 394
Query: 361 ccggctctgtttgaaggtacggttgctgataatataaggtatggaccacaattgaggggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ccggctctgtttgaaggtacggttgctgataatataaggtatggaccacaattgaggggg 454
Query: 421 aagaaacttactgaccatgaggttcacaagttgcttaaacttgctgaccttgattctact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aagaaacttactgaccatgaggttcacaagttgcttaaacttgctgaccttgattctact 514
Query: 481 tttcacaaaaagaatggtagtgaattatct-gtaggtcaagctcaaagggttgcacttgc 539
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 515 tttcacaaaaagaatggtagtgaattatctggtaggtcaagctcaaagggttgcacttgc 574
Query: 540 aagaaccctagctaatgaaccaga 563
|||||||||||||||||||||||
Sbjct: 575 -agaaccctagctaatgaaccaga 597
>gi|268518187|gb|FM888461.1|FM888461 FM888461 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001881,
mRNA sequence
Length = 592
Score = 377 bits (190), Expect = e-105
Identities = 190/190 (100%)
Strand = Plus / Minus
Query: 375 aggtacggttgctgataatataaggtatggaccacaattgagggggaagaaacttactga 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aggtacggttgctgataatataaggtatggaccacaattgagggggaagaaacttactga 164
Query: 435 ccatgaggttcacaagttgcttaaacttgctgaccttgattctacttttcacaaaaagaa 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ccatgaggttcacaagttgcttaaacttgctgaccttgattctacttttcacaaaaagaa 104
Query: 495 tggtagtgaattatctgtaggtcaagctcaaagggttgcacttgcaagaaccctagctaa 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tggtagtgaattatctgtaggtcaagctcaaagggttgcacttgcaagaaccctagctaa 44
Query: 555 tgaaccagag 564
||||||||||
Sbjct: 43 tgaaccagag 34