Jatropha Genome Database

JcCA0270671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0270671.10 - phase: 0 
         (1443 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525778|gb|FM891033.1|FM891033 FM891033 Jatropha curcas emb...    86   1e-16

>gi|268525778|gb|FM891033.1|FM891033 FM891033 Jatropha curcas embryo
            56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001018,
            mRNA sequence
          Length = 231

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                        
Query: 1361 agctgaggcaaattgggttcattgtttactccattggtaagccattagatgcatggttga 1420
            |||||||| | ||||| |||||||| ||||| |||||||||||| | ||||||||| | |
Sbjct: 146  agctgagggagattggtttcattgtatactcaattggtaagccacttgatgcatggctca 87

                                   
Query: 1421 aggacatgcctgctgttgcttaa 1443
            |||||||||||||||| ||||||
Sbjct: 86   aggacatgcctgctgtagcttaa 64