Jatropha Genome Database

JcCA0267991.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0267991.10 - phase: 0 /partial
         (1104 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522359|gb|FM894504.1|FM894504 FM894504 Jatropha curcas emb...   440   e-123

>gi|268522359|gb|FM894504.1|FM894504 FM894504 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000181,
            mRNA sequence
          Length = 540

 Score =  440 bits (222), Expect = e-123
 Identities = 222/222 (100%)
 Strand = Plus / Minus

                                                                        
Query: 883  ggaagaattcatatggcgcctttcagtgatgaatatttgtttgttgaaattgctaataag 942
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540  ggaagaattcatatggcgcctttcagtgatgaatatttgtttgttgaaattgctaataag 481

                                                                        
Query: 943  gcgctcttttggcagcaacagaactattatggagttgatctacaacctctatatggatct 1002
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480  gcgctcttttggcagcaacagaactattatggagttgatctacaacctctatatggatct 421

                                                                        
Query: 1003 gcattccagggatacttttctcagcctgtagtagatgctttcgatccaaggttattggtg 1062
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420  gcattccagggatacttttctcagcctgtagtagatgctttcgatccaaggttattggtg 361

                                                      
Query: 1063 gctcccgcaacatttcacgtcatagattttactgaaataaag 1104
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360  gctcccgcaacatttcacgtcatagattttactgaaataaag 319