Jatropha Genome Database
- JcCA0265541.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0265541.10 + phase: 1 /pseudo/partial
(479 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268526355|gb|FM891611.1|FM891611 FM891611 Jatropha curcas emb... 664 0.0
gi|268520096|gb|FM889944.1|FM889944 FM889944 Jatropha curcas emb... 133 2e-31
>gi|268526355|gb|FM891611.1|FM891611 FM891611 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001935,
mRNA sequence
Length = 530
Score = 664 bits (335), Expect = 0.0
Identities = 433/451 (96%), Gaps = 16/451 (3%)
Strand = Plus / Minus
Query: 29 attacaagtccggatgggaagatttttaagcctgtgaaagcgaattccacattttgcttc 88
||||||||||||||||| |||||||| |||||||| |||||||||||||||||| ||| |
Sbjct: 530 attacaagtccggatgg-aagatttt-aagcctgt-aaagcgaattccacattt-gct-c 476
Query: 89 ggctatacaaattggggacccggtttctatagacagagctgtatatgctttgaagaattc 148
|||||||||||| |||||||||||| ||||||||||||||||| |||| ||| |||
Sbjct: 475 ggctatacaaat--gggacccggttt--atagacagagctgtata-gcttg--aga-ttc 424
Query: 149 aaatgggattgttgaggaagccacagaggaggagttgatggatgcaatggcacaagctga 208
|||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 423 aaatgg--ttgttgag-aagccacagaggagtagttgatggatgcaatggcacaagctga 367
Query: 209 ttctacagggatgtttatctgcccacatacgggagttgcattgaccgcattgaataagct 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttctacagggatgtttatctgcccacatacgggagttgcattgaccgcattgaataagct 307
Query: 269 taggaatagtggggttatagggcctatggataggacagtggtggtgagcacagctcatgg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 taggaatagtggggttatagggcctatggataggacagtggtggtgagcacagctcatgg 247
Query: 329 attgaaatttactcaatctaagattgattaccactccaaagcaataccagatatggcctg 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 attgaaatttactcaatctaagattgattaccactccaaagcaataccagatatggcctg 187
Query: 389 caggtttgctaaccctcctgtgcaagttaaggcagaatttggggctgtcatggatgttct 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 caggtttgctaaccctcctgtgcaagttaaggcagaatttggggctgtcatggatgttct 127
Query: 449 gaagaattttttgggtaacagggttcctaaa 479
|||||||||||||||||||||||||||||||
Sbjct: 126 gaagaattttttgggtaacagggttcctaaa 96
>gi|268520096|gb|FM889944.1|FM889944 FM889944 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003705,
mRNA sequence
Length = 138
Score = 133 bits (67), Expect = 2e-31
Identities = 77/79 (97%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 401 ccctcctgtgcaagttaaggcagaatttggggctgtcatggatgttctgaagaatttttt 460
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccctcctgtgcaagtta-ggcagaatttggggctgtcatggatgttctgaagaatttttg 59
Query: 461 gggtaacagggttcctaaa 479
|||||||||||||||||||
Sbjct: 60 gggtaacagggttcctaaa 78