Jatropha Genome Database

JcCA0261901.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0261901.10 - phase: 2 /pseudo/partial
         (1084 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268526416|gb|FM895270.1|FM895270 FM895270 Jatropha curcas emb...   375   e-104

>gi|268526416|gb|FM895270.1|FM895270 FM895270 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002068,
            mRNA sequence
          Length = 454

 Score =  375 bits (189), Expect = e-104
 Identities = 189/189 (100%)
 Strand = Plus / Plus

                                                                        
Query: 851  gttaagaaaggatgggcttctcttcagggtattccgaggacagttgcttttgacacaaag 910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gttaagaaaggatgggcttctcttcagggtattccgaggacagttgcttttgacacaaag 60

                                                                        
Query: 911  agtggcagcaatttgcttcagtggccagtcgaagaagtagagaatttgagattaagaagc 970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   agtggcagcaatttgcttcagtggccagtcgaagaagtagagaatttgagattaagaagc 120

                                                                        
Query: 971  aaagaattcaagaacgtagaggtcaagccagggtcagttgtgcctctagatcttgaagca 1030
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aaagaattcaagaacgtagaggtcaagccagggtcagttgtgcctctagatcttgaagca 180

                     
Query: 1031 gctacacag 1039
            |||||||||
Sbjct: 181  gctacacag 189