Jatropha Genome Database

JcCA0255951.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0255951.10 - phase: 0 /pseudo
         (487 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268516924|gb|FM892476.1|FM892476 FM892476 Jatropha curcas emb...   611   e-175

>gi|268516924|gb|FM892476.1|FM892476 FM892476 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003038,
           mRNA sequence
          Length = 497

 Score =  611 bits (308), Expect = e-175
 Identities = 321/324 (99%), Gaps = 1/324 (0%)
 Strand = Plus / Minus

                                                                       
Query: 128 gtcaggcccaactgaagcccgaaaccgccccaaagcttcgagcagctctgcctgaactat 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gtcaggcccaactgaagcccgaaaccgccccaaagcttcgagcagctctgcctgaactat 438

                                                                       
Query: 188 ctgatgagatgcttcaggagatgatgagaccacccatgaggtcttatgaccccaatttga 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctgatgagatgcttcaggagatgatgagaccacccatgaggtcttatgaccccaatttga 378

                                                                       
Query: 248 ttcaagaacccactgtttacaggttgaatgaagcagttatgcattttggtgaaagcataa 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttcaagaacccactgtttacaggttgaatgaagcagttatgcattttggtgaaagcataa 318

                                                                       
Query: 308 aggaaattatcaatgaagagtttggtgatggcattcatgagagccatagacttcttttgc 367
           ||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||
Sbjct: 317 aggaaattatcaatgaagagtttggtgatggca-tcatgtcagccatagacttcttttgc 259

                                                                       
Query: 368 tctgtcgacaaagtcaaaggtgtggatggaaaagatcgtgtagttgtgacatttgatggg 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tctgtcgacaaagtcaaaggtgtggatggaaaagatcgtgtagttgtgacatttgatggg 199

                                   
Query: 428 aagtatttgcctcatactgagcag 451
           ||||||||||||||||||||||||
Sbjct: 198 aagtatttgcctcatactgagcag 175