Jatropha Genome Database
- JcCA0254771.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0254771.10 + phase: 0
(312 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|254029187|gb|GR716936.1|GR716936 JcrRL_ASE0005 Salinity toler... 507 e-144
gi|254029188|gb|GR716937.1|GR716937 JcrRL_ASE0006 Salinity toler... 507 e-144
gi|268523873|gb|FM890559.1|FM890559 FM890559 Jatropha curcas emb... 507 e-144
gi|268520690|gb|FM889448.1|FM889448 FM889448 Jatropha curcas emb... 492 e-139
>gi|254029187|gb|GR716936.1|GR716936 JcrRL_ASE0005 Salinity
tolerance responsive genes from Jatropha curcas root
cDNA Jatropha curcas cDNA, mRNA sequence
Length = 521
Score = 507 bits (256), Expect = e-144
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 57 ccattttgctgaggctgatcatcaaacggtcaagtcaaaactagacgcaactaattctcc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ccattttgctgaggctgatcatcaaacggtcaagtcaaaactagacgcaactaattctcc 148
Query: 117 cgctgaggaaattgattgcggtagcgcttgcacagccaggtgtcagttatcgtcaaggcc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 cgctgaggaaattgattgcggtagcgcttgcacagccaggtgtcagttatcgtcaaggcc 208
Query: 177 aaacctatgcaagagggcatgcgggacatgctgtgcccgttgcaagtgtgttccgccggg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aaacctatgcaagagggcatgcgggacatgctgtgcccgttgcaagtgtgttccgccggg 268
Query: 237 aactgccggtaactatgaggcctgcccctgttacgccagcttgactacccatggtggccg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aactgccggtaactatgaggcctgcccctgttacgccagcttgactacccatggtggccg 328
Query: 297 acgcaagtgtccttga 312
||||||||||||||||
Sbjct: 329 acgcaagtgtccttga 344
>gi|254029188|gb|GR716937.1|GR716937 JcrRL_ASE0006 Salinity
tolerance responsive genes from Jatropha curcas root
cDNA Jatropha curcas cDNA, mRNA sequence
Length = 481
Score = 507 bits (256), Expect = e-144
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 57 ccattttgctgaggctgatcatcaaacggtcaagtcaaaactagacgcaactaattctcc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ccattttgctgaggctgatcatcaaacggtcaagtcaaaactagacgcaactaattctcc 134
Query: 117 cgctgaggaaattgattgcggtagcgcttgcacagccaggtgtcagttatcgtcaaggcc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cgctgaggaaattgattgcggtagcgcttgcacagccaggtgtcagttatcgtcaaggcc 194
Query: 177 aaacctatgcaagagggcatgcgggacatgctgtgcccgttgcaagtgtgttccgccggg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aaacctatgcaagagggcatgcgggacatgctgtgcccgttgcaagtgtgttccgccggg 254
Query: 237 aactgccggtaactatgaggcctgcccctgttacgccagcttgactacccatggtggccg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aactgccggtaactatgaggcctgcccctgttacgccagcttgactacccatggtggccg 314
Query: 297 acgcaagtgtccttga 312
||||||||||||||||
Sbjct: 315 acgcaagtgtccttga 330
>gi|268523873|gb|FM890559.1|FM890559 FM890559 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000445,
mRNA sequence
Length = 480
Score = 507 bits (256), Expect = e-144
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 57 ccattttgctgaggctgatcatcaaacggtcaagtcaaaactagacgcaactaattctcc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ccattttgctgaggctgatcatcaaacggtcaagtcaaaactagacgcaactaattctcc 135
Query: 117 cgctgaggaaattgattgcggtagcgcttgcacagccaggtgtcagttatcgtcaaggcc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 cgctgaggaaattgattgcggtagcgcttgcacagccaggtgtcagttatcgtcaaggcc 195
Query: 177 aaacctatgcaagagggcatgcgggacatgctgtgcccgttgcaagtgtgttccgccggg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 aaacctatgcaagagggcatgcgggacatgctgtgcccgttgcaagtgtgttccgccggg 255
Query: 237 aactgccggtaactatgaggcctgcccctgttacgccagcttgactacccatggtggccg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aactgccggtaactatgaggcctgcccctgttacgccagcttgactacccatggtggccg 315
Query: 297 acgcaagtgtccttga 312
||||||||||||||||
Sbjct: 316 acgcaagtgtccttga 331
>gi|268520690|gb|FM889448.1|FM889448 FM889448 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003117,
mRNA sequence
Length = 427
Score = 492 bits (248), Expect = e-139
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 65 ctgaggctgatcatcaaacggtcaagtcaaaactagacgcaactaattctcccgctgagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaggctgatcatcaaacggtcaagtcaaaactagacgcaactaattctcccgctgagg 60
Query: 125 aaattgattgcggtagcgcttgcacagccaggtgtcagttatcgtcaaggccaaacctat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaattgattgcggtagcgcttgcacagccaggtgtcagttatcgtcaaggccaaacctat 120
Query: 185 gcaagagggcatgcgggacatgctgtgcccgttgcaagtgtgttccgccgggaactgccg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaagagggcatgcgggacatgctgtgcccgttgcaagtgtgttccgccgggaactgccg 180
Query: 245 gtaactatgaggcctgcccctgttacgccagcttgactacccatggtggccgacgcaagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtaactatgaggcctgcccctgttacgccagcttgactacccatggtggccgacgcaagt 240
Query: 305 gtccttga 312
||||||||
Sbjct: 241 gtccttga 248