Jatropha Genome Database
- JcCA0254251.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0254251.10 + phase: 0
(594 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268516974|gb|FM892526.1|FM892526 FM892526 Jatropha curcas emb... 111 9e-25
gi|268523729|gb|FM892262.1|FM892262 FM892262 Jatropha curcas emb... 111 9e-25
gi|268525534|gb|FM890789.1|FM890789 FM890789 Jatropha curcas emb... 111 9e-25
gi|268517537|gb|FM889248.1|FM889248 FM889248 Jatropha curcas emb... 60 3e-09
>gi|268516974|gb|FM892526.1|FM892526 FM892526 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003095,
mRNA sequence
Length = 595
Score = 111 bits (56), Expect = 9e-25
Identities = 137/164 (83%)
Strand = Plus / Plus
Query: 40 gatggggctgtgggaaagacttgcatgctcatttcctacactagcaatacctttccaccg 99
||||| ||||| || ||||||||||||||||| |||||||| ||||| || ||||| |
Sbjct: 185 gatggtgctgttggcaagacttgcatgctcatctcctacaccagcaacacttttcctact 244
Query: 100 gactatgttccgacagtgtttgacaatttcagtgctaatgtggtggtagatggtagtata 159
|||||||| || || ||||||||||| |||||||| |||||||| || ||||| || | |
Sbjct: 245 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 304
Query: 160 gttaatctcggattatgggacacagctgggcaggaagattataa 203
|| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 305 gtcaatctagggttgtgggatactgctggccaggaagattataa 348
>gi|268523729|gb|FM892262.1|FM892262 FM892262 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_002766,
mRNA sequence
Length = 569
Score = 111 bits (56), Expect = 9e-25
Identities = 137/164 (83%)
Strand = Plus / Plus
Query: 40 gatggggctgtgggaaagacttgcatgctcatttcctacactagcaatacctttccaccg 99
||||| ||||| || ||||||||||||||||| |||||||| ||||| || ||||| |
Sbjct: 207 gatggtgctgttggcaagacttgcatgctcatctcctacaccagcaacacttttcctact 266
Query: 100 gactatgttccgacagtgtttgacaatttcagtgctaatgtggtggtagatggtagtata 159
|||||||| || || ||||||||||| |||||||| |||||||| || ||||| || | |
Sbjct: 267 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 326
Query: 160 gttaatctcggattatgggacacagctgggcaggaagattataa 203
|| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 327 gtcaatctagggttgtgggatactgctggccaggaagattataa 370
>gi|268525534|gb|FM890789.1|FM890789 FM890789 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000728,
mRNA sequence
Length = 546
Score = 111 bits (56), Expect = 9e-25
Identities = 137/164 (83%)
Strand = Plus / Plus
Query: 40 gatggggctgtgggaaagacttgcatgctcatttcctacactagcaatacctttccaccg 99
||||| ||||| || ||||||||||||||||| |||||||| ||||| || ||||| |
Sbjct: 214 gatggtgctgttggcaagacttgcatgctcatctcctacaccagcaacacttttcctact 273
Query: 100 gactatgttccgacagtgtttgacaatttcagtgctaatgtggtggtagatggtagtata 159
|||||||| || || ||||||||||| |||||||| |||||||| || ||||| || | |
Sbjct: 274 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 333
Query: 160 gttaatctcggattatgggacacagctgggcaggaagattataa 203
|| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 334 gtcaatctagggttgtgggatactgctggccaggaagattataa 377
>gi|268517537|gb|FM889248.1|FM889248 FM889248 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002854,
mRNA sequence
Length = 327
Score = 60.0 bits (30), Expect = 3e-09
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 407 caccaataacaacagctcagggcgaggaactgaagaaaatgatcggtgcggtaacttaca 466
||||||| ||||| ||||||| |||||||| ||||| ||||| ||||| | |||||
Sbjct: 1 caccaatcacaacttctcagggagaggaactaaagaagatgattggtgctgctgtttaca 60
Query: 467 tagagtgcagttccaaaactcaacagaatgtgaaggctgtgtttga 512
|||||||| || || |||||||||||||||||||| || |||||
Sbjct: 61 gtgagtgcagctcaaagactcaacagaatgtgaaggcagtttttga 106