Jatropha Genome Database

JcCA0250521.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0250521.10 + phase: 0 
         (360 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262090863|gb|GT229221.1|GT229221 JC786 Jatropha seeds from fr...   180   7e-46

>gi|262090863|gb|GT229221.1|GT229221 JC786 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL19SE.H09.scf 5', mRNA sequence
          Length = 270

 Score =  180 bits (91), Expect = 7e-46
 Identities = 101/103 (98%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                       
Query: 259 attgccaatccacaa-atggtgaaattgcattcttttgataccaagatacacaaggttga 317
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 attgccaatccactatatggtgaaattgcattcttttgataccaagatacacaaggttga 211

                                                      
Query: 318 cactctggtttcatacaagaatgacgaatgggatgagcagtag 360
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cactctggtttcatacaagaatgacgaatgggatgagcagtag 168