Jatropha Genome Database

JcCA0247191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0247191.10 + phase: 1 /partial
         (410 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524469|gb|FM895149.1|FM895149 FM895149 Jatropha curcas emb...   557   e-159

>gi|268524469|gb|FM895149.1|FM895149 FM895149 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001928,
           mRNA sequence
          Length = 689

 Score =  557 bits (281), Expect = e-159
 Identities = 281/281 (100%)
 Strand = Plus / Plus

                                                                       
Query: 130 cttaccatggttcaactttgatatcagccagtctttctggacttccagcattgcaccaaa 189
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7   cttaccatggttcaactttgatatcagccagtctttctggacttccagcattgcaccaaa 66

                                                                       
Query: 190 agtttgatcttcccgctccatttgtcttgcacactgactgccctcattactggcgttatc 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  agtttgatcttcccgctccatttgtcttgcacactgactgccctcattactggcgttatc 126

                                                                       
Query: 250 atcttccaggtgagacagaggaagaattctcaagcagattagctaagaatttggaggatc 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atcttccaggtgagacagaggaagaattctcaagcagattagctaagaatttggaggatc 186

                                                                       
Query: 310 tcatcctgaaagagggaccagagacgattgctgcatttattgcggagcctgtcatggggg 369
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcatcctgaaagagggaccagagacgattgctgcatttattgcggagcctgtcatggggg 246

                                                    
Query: 370 caggaggtgtgatacctccacctgcatcttatttcgaaaag 410
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 caggaggtgtgatacctccacctgcatcttatttcgaaaag 287