Jatropha Genome Database
- JcCA0242371.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0242371.10 - phase: 0 /pseudo/partial
(441 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268516974|gb|FM892526.1|FM892526 FM892526 Jatropha curcas emb... 297 5e-81
gi|268523729|gb|FM892262.1|FM892262 FM892262 Jatropha curcas emb... 297 5e-81
gi|268525534|gb|FM890789.1|FM890789 FM890789 Jatropha curcas emb... 297 5e-81
>gi|268516974|gb|FM892526.1|FM892526 FM892526 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003095,
mRNA sequence
Length = 595
Score = 297 bits (150), Expect = 5e-81
Identities = 300/350 (85%)
Strand = Plus / Plus
Query: 1 atgagtgcctctaggttcattaagtgcgtcaccgtcggcgatggtgccgtcggaaagacc 60
|||||||| |||||||||||||| |||||||| || || |||||||| || || |||||
Sbjct: 146 atgagtgcttctaggttcattaaatgcgtcacagttggtgatggtgctgttggcaagact 205
Query: 61 tgcatgcttatttcctacaccagcaacaccttccctacggattatgtaccaactgttttt 120
|||||||| || ||||||||||||||||| || ||||| || ||||| || ||||| |||
Sbjct: 206 tgcatgctcatctcctacaccagcaacacttttcctactgactatgtgcctactgtgttt 265
Query: 121 gacaatttcagtgcaaatgtggttgtggatgggagcactgttaatctaggattatgggat 180
||||| |||||||| ||||||||||||||||||||||| || |||||||| || ||||||
Sbjct: 266 gacaacttcagtgcgaatgtggttgtggatgggagcacagtcaatctagggttgtgggat 325
Query: 181 actgctggtcaggaggattacaatcgattaagacctttaagctatcgaggtgcagatgtc 240
|||||||| ||||| ||||| ||| ||||||||||||| |||||||| || || |||||
Sbjct: 326 actgctggccaggaagattataatagattaagacctttgagctatcgtggggctgatgtt 385
Query: 241 tttattctggcattctctttaatcagcaaggccagctatgaaaatgttgccaaaaagtgg 300
|| | || || |||||| | || ||||||||||| |||||||||||||| || ||||||
Sbjct: 386 ttcttgcttgctttctctctcattagcaaggccagttatgaaaatgttgcaaagaagtgg 445
Query: 301 attcctgaactgaagcattatgcacctggagttccggttattcttgttgg 350
||||||||| ||| |||||||||||||||||| || |||| ||||||||
Sbjct: 446 attcctgaattgaggcattatgcacctggagtaccaattatccttgttgg 495
>gi|268523729|gb|FM892262.1|FM892262 FM892262 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_002766,
mRNA sequence
Length = 569
Score = 297 bits (150), Expect = 5e-81
Identities = 300/350 (85%)
Strand = Plus / Plus
Query: 1 atgagtgcctctaggttcattaagtgcgtcaccgtcggcgatggtgccgtcggaaagacc 60
|||||||| |||||||||||||| |||||||| || || |||||||| || || |||||
Sbjct: 168 atgagtgcttctaggttcattaaatgcgtcacagttggtgatggtgctgttggcaagact 227
Query: 61 tgcatgcttatttcctacaccagcaacaccttccctacggattatgtaccaactgttttt 120
|||||||| || ||||||||||||||||| || ||||| || ||||| || ||||| |||
Sbjct: 228 tgcatgctcatctcctacaccagcaacacttttcctactgactatgtgcctactgtgttt 287
Query: 121 gacaatttcagtgcaaatgtggttgtggatgggagcactgttaatctaggattatgggat 180
||||| |||||||| ||||||||||||||||||||||| || |||||||| || ||||||
Sbjct: 288 gacaacttcagtgcgaatgtggttgtggatgggagcacagtcaatctagggttgtgggat 347
Query: 181 actgctggtcaggaggattacaatcgattaagacctttaagctatcgaggtgcagatgtc 240
|||||||| ||||| ||||| ||| ||||||||||||| |||||||| || || |||||
Sbjct: 348 actgctggccaggaagattataatagattaagacctttgagctatcgtggggctgatgtt 407
Query: 241 tttattctggcattctctttaatcagcaaggccagctatgaaaatgttgccaaaaagtgg 300
|| | || || |||||| | || ||||||||||| |||||||||||||| || ||||||
Sbjct: 408 ttcttgcttgctttctctctcattagcaaggccagttatgaaaatgttgcaaagaagtgg 467
Query: 301 attcctgaactgaagcattatgcacctggagttccggttattcttgttgg 350
||||||||| ||| |||||||||||||||||| || |||| ||||||||
Sbjct: 468 attcctgaattgaggcattatgcacctggagtaccaattatccttgttgg 517
>gi|268525534|gb|FM890789.1|FM890789 FM890789 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000728,
mRNA sequence
Length = 546
Score = 297 bits (150), Expect = 5e-81
Identities = 300/350 (85%)
Strand = Plus / Plus
Query: 1 atgagtgcctctaggttcattaagtgcgtcaccgtcggcgatggtgccgtcggaaagacc 60
|||||||| |||||||||||||| |||||||| || || |||||||| || || |||||
Sbjct: 175 atgagtgcttctaggttcattaaatgcgtcacagttggtgatggtgctgttggcaagact 234
Query: 61 tgcatgcttatttcctacaccagcaacaccttccctacggattatgtaccaactgttttt 120
|||||||| || ||||||||||||||||| || ||||| || ||||| || ||||| |||
Sbjct: 235 tgcatgctcatctcctacaccagcaacacttttcctactgactatgtgcctactgtgttt 294
Query: 121 gacaatttcagtgcaaatgtggttgtggatgggagcactgttaatctaggattatgggat 180
||||| |||||||| ||||||||||||||||||||||| || |||||||| || ||||||
Sbjct: 295 gacaacttcagtgcgaatgtggttgtggatgggagcacagtcaatctagggttgtgggat 354
Query: 181 actgctggtcaggaggattacaatcgattaagacctttaagctatcgaggtgcagatgtc 240
|||||||| ||||| ||||| ||| ||||||||||||| |||||||| || || |||||
Sbjct: 355 actgctggccaggaagattataatagattaagacctttgagctatcgtggggctgatgtt 414
Query: 241 tttattctggcattctctttaatcagcaaggccagctatgaaaatgttgccaaaaagtgg 300
|| | || || |||||| | || ||||||||||| |||||||||||||| || ||||||
Sbjct: 415 ttcttgcttgctttctctctcattagcaaggccagttatgaaaatgttgcaaagaagtgg 474
Query: 301 attcctgaactgaagcattatgcacctggagttccggttattcttgttgg 350
||||||||| ||| |||||||||||||||||| || |||| ||||||||
Sbjct: 475 attcctgaattgaggcattatgcacctggagtaccaattatccttgttgg 524