Jatropha Genome Database
- JcCA0237851.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0237851.10 - phase: 0 /pseudo/partial
(305 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237680717|gb|GO246868.1|GO246868 JcrME_RL0412 Expressed seque... 383 e-107
gi|237680920|gb|GO247111.1|GO247111 JcrME_RL0655 Expressed seque... 383 e-107
gi|268517259|gb|FM893607.1|FM893607 FM893607 Jatropha curcas emb... 383 e-107
gi|268525555|gb|FM890810.1|FM890810 FM890810 Jatropha curcas emb... 383 e-107
gi|268524764|gb|FM895462.1|FM895462 FM895462 Jatropha curcas emb... 278 3e-75
>gi|237680717|gb|GO246868.1|GO246868 JcrME_RL0412 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 681
Score = 383 bits (193), Expect = e-107
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 1 atggctgtcatcaaagtccatggaaaccctatttcaaccgctacacagagagttctagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atggctgtcatcaaagtccatggaaaccctatttcaaccgctacacagagagttctagct 119
Query: 61 accctctacgagaaagatttagaatttgagtttgttcatatcgatcttgccacgggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 accctctacgagaaagatttagaatttgagtttgttcatatcgatcttgccacgggagag 179
Query: 121 cacaagagggagcctttcatttccctaaatccatttggtcaagtcccagctctagaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cacaagagggagcctttcatttccctaaatccatttggtcaagtcccagctctagaacac 239
Query: 181 ggagatctcaagc 193
|||||||||||||
Sbjct: 240 ggagatctcaagc 252
>gi|237680920|gb|GO247111.1|GO247111 JcrME_RL0655 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 634
Score = 383 bits (193), Expect = e-107
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 1 atggctgtcatcaaagtccatggaaaccctatttcaaccgctacacagagagttctagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 atggctgtcatcaaagtccatggaaaccctatttcaaccgctacacagagagttctagct 117
Query: 61 accctctacgagaaagatttagaatttgagtttgttcatatcgatcttgccacgggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 accctctacgagaaagatttagaatttgagtttgttcatatcgatcttgccacgggagag 177
Query: 121 cacaagagggagcctttcatttccctaaatccatttggtcaagtcccagctctagaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 cacaagagggagcctttcatttccctaaatccatttggtcaagtcccagctctagaacac 237
Query: 181 ggagatctcaagc 193
|||||||||||||
Sbjct: 238 ggagatctcaagc 250
>gi|268517259|gb|FM893607.1|FM893607 FM893607 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004491,
mRNA sequence
Length = 397
Score = 383 bits (193), Expect = e-107
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 1 atggctgtcatcaaagtccatggaaaccctatttcaaccgctacacagagagttctagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 atggctgtcatcaaagtccatggaaaccctatttcaaccgctacacagagagttctagct 102
Query: 61 accctctacgagaaagatttagaatttgagtttgttcatatcgatcttgccacgggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 accctctacgagaaagatttagaatttgagtttgttcatatcgatcttgccacgggagag 162
Query: 121 cacaagagggagcctttcatttccctaaatccatttggtcaagtcccagctctagaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cacaagagggagcctttcatttccctaaatccatttggtcaagtcccagctctagaacac 222
Query: 181 ggagatctcaagc 193
|||||||||||||
Sbjct: 223 ggagatctcaagc 235
>gi|268525555|gb|FM890810.1|FM890810 FM890810 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000752,
mRNA sequence
Length = 472
Score = 383 bits (193), Expect = e-107
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 1 atggctgtcatcaaagtccatggaaaccctatttcaaccgctacacagagagttctagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atggctgtcatcaaagtccatggaaaccctatttcaaccgctacacagagagttctagct 112
Query: 61 accctctacgagaaagatttagaatttgagtttgttcatatcgatcttgccacgggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 accctctacgagaaagatttagaatttgagtttgttcatatcgatcttgccacgggagag 172
Query: 121 cacaagagggagcctttcatttccctaaatccatttggtcaagtcccagctctagaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 cacaagagggagcctttcatttccctaaatccatttggtcaagtcccagctctagaacac 232
Query: 181 ggagatctcaagc 193
|||||||||||||
Sbjct: 233 ggagatctcaagc 245
>gi|268524764|gb|FM895462.1|FM895462 FM895462 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002384,
mRNA sequence
Length = 634
Score = 278 bits (140), Expect = 3e-75
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 54 tctagctaccctctacgagaaagatttagaatttgagtttgttcatatcgatcttgccac 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tctagctaccctctacgagaaagatttagaatttgagtttgttcatatcgatcttgccac 65
Query: 114 gggagagcacaagagggagcctttcatttccctaaatccatttggtcaagtcccagctct 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gggagagcacaagagggagcctttcatttccctaaatccatttggtcaagtcccagctct 125
Query: 174 agaacacggagatctcaagc 193
||||||||||||||||||||
Sbjct: 126 agaacacggagatctcaagc 145