Jatropha Genome Database

JcCA0229931.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0229931.10 - phase: 1 /partial
         (1800 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521639|gb|FM896847.1|FM896847 FM896847 Jatropha curcas emb...    60   9e-09

>gi|268521639|gb|FM896847.1|FM896847 FM896847 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004253,
            mRNA sequence
          Length = 487

 Score = 60.0 bits (30), Expect = 9e-09
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 1686 gagaagctcaatcaaaggttttatgcattgcgagctgtggttccgaatgtgtccaagatg 1745
            |||||||||||||| || |||||||||||| ||||||| ||||| ||| | || ||||||
Sbjct: 482  gagaagctcaatcagagattttatgcattgagagctgttgttcccaatatctctaagatg 423

              
Query: 1746 ga 1747
            ||
Sbjct: 422  ga 421