Jatropha Genome Database

JcCA0224481.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0224481.10 - phase: 1 /pseudo/partial
         (1001 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525022|gb|FM895664.1|FM895664 FM895664 Jatropha curcas emb...   208   9e-54

>gi|268525022|gb|FM895664.1|FM895664 FM895664 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002625,
            mRNA sequence
          Length = 477

 Score =  208 bits (105), Expect = 9e-54
 Identities = 114/116 (98%), Gaps = 2/116 (1%)
 Strand = Plus / Plus

                                                                        
Query: 888  tccttgcctggattttcttttacttctggtgctaacaaagcgatcactgtttgcaggaac 947
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3    tccttgcctggattttcttttacttctggtgctaacaaagcgatcactgtttgcaggaac 62

                                                                    
Query: 948  ct--gctcattattaagtcatgcagagtctctgactcctaactttttgaatgatga 1001
            ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63   ctgcgctcattattaagtcatgcagagtctctgactcctaactttttgaatgatga 118