Jatropha Genome Database

JcCA0194091.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0194091.10 - phase: 2 /partial
         (1422 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524098|gb|FM894777.1|FM894777 FM894777 Jatropha curcas emb...   597   e-170

>gi|268524098|gb|FM894777.1|FM894777 FM894777 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000646,
            mRNA sequence
          Length = 439

 Score =  597 bits (301), Expect = e-170
 Identities = 314/317 (99%), Gaps = 1/317 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1107 caattacaaaaagtggttctgtcagaagtggaaggaagtttcgatgggtaaagcttgagg 1166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5    caattacaaaaagtggttctgtcagaagtggaaggaagtttcgatgggtaaagcttgagg 64

                                                                        
Query: 1167 attcagtggacacaaagctgttgggatacccacaggctttgactaaattctgttacttta 1226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65   attcagtggacacaaagctgttgggatacccacaggctttgactaaattctgttacttta 124

                                                                        
Query: 1227 ttatggatgccttgagagagaaaggagctagagcaaagcccttggtttgtgcatgcttat 1286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125  ttatggatgccttgagagagaaaggagctagagcaaagcccttggtttgtgcatgcttat 184

                                                                        
Query: 1287 cacaagaaccaaacaagatgttgattgttggggtttgtggaaagccacgacttggtgcag 1346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185  cacaagaaccaaacaagatgttgattgttggggtttgtggaaagccacgacttggtgcag 244

                                                                        
Query: 1347 ttcaaggaaatgcatttggagttgcatttagaaatgcagcggagg-agattggagcagaa 1405
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 245  ttcaaggaaatgcatttggagttgcatttagaaatgcagcggaggcagattggagcagag 304

                             
Query: 1406 gtcttccatgagttgtt 1422
             ||||||||||||||||
Sbjct: 305  ttcttccatgagttgtt 321