Jatropha Genome Database

JcCA0155001.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0155001.10 + phase: 0 /partial/short
         (117 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680890|gb|GO247047.1|GO247047 JcrME_RL0591 Expressed seque...   226   4e-60
gi|237680898|gb|GO247055.1|GO247055 JcrME_RL0599 Expressed seque...   226   4e-60

>gi|237680890|gb|GO247047.1|GO247047 JcrME_RL0591 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 628

 Score =  226 bits (114), Expect = 4e-60
 Identities = 114/114 (100%)
 Strand = Plus / Minus

                                                                       
Query: 4   cagattcatgagaacatgaaagctatcgacgtgatccccttgttaactcctgccgtgatg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cagattcatgagaacatgaaagctatcgacgtgatccccttgttaactcctgccgtgatg 370

                                                                 
Query: 64  gagaagattgaggctgttgttcaaaccaagccaaaacgtccagattcttatagg 117
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gagaagattgaggctgttgttcaaaccaagccaaaacgtccagattcttatagg 316


>gi|237680898|gb|GO247055.1|GO247055 JcrME_RL0599 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 632

 Score =  226 bits (114), Expect = 4e-60
 Identities = 114/114 (100%)
 Strand = Plus / Minus

                                                                       
Query: 4   cagattcatgagaacatgaaagctatcgacgtgatccccttgttaactcctgccgtgatg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cagattcatgagaacatgaaagctatcgacgtgatccccttgttaactcctgccgtgatg 364

                                                                 
Query: 64  gagaagattgaggctgttgttcaaaccaagccaaaacgtccagattcttatagg 117
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gagaagattgaggctgttgttcaaaccaagccaaaacgtccagattcttatagg 310