Jatropha Genome Database

JcCA0154771.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0154771.20 - phase: 0 
         (528 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524892|gb|FM895590.1|FM895590 FM895590 Jatropha curcas emb...   321   5e-88

>gi|268524892|gb|FM895590.1|FM895590 FM895590 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002538,
           mRNA sequence
          Length = 222

 Score =  321 bits (162), Expect = 5e-88
 Identities = 162/162 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcagagaagtgtcagagagttgcgttgatagcttactgacggagatggtgtcatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atgggcagagaagtgtcagagagttgcgttgatagcttactgacggagatggtgtcatca 120

                                                                       
Query: 61  tactgcaataggttcgacgctaataaacctgagctcgccggccggcggatcgaggctatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactgcaataggttcgacgctaataaacctgagctcgccggccggcggatcgaggctatt 180

                                                     
Query: 121 ggctatcaggtcggccaccagctagccgaacggtatactatg 162
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggctatcaggtcggccaccagctagccgaacggtatactatg 222