Jatropha Genome Database

JcCA0153671.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0153671.20 - phase: 0 
         (840 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522393|gb|FM894538.1|FM894538 FM894538 Jatropha curcas emb...   143   4e-34

>gi|268522393|gb|FM894538.1|FM894538 FM894538 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000323,
           mRNA sequence
          Length = 423

 Score =  143 bits (72), Expect = 4e-34
 Identities = 156/184 (84%)
 Strand = Plus / Minus

                                                                       
Query: 653 tgaatcagcctcctgaaggatgggatggtggcataggatttgtatccaaagaaatgattg 712
           |||||||||||||||||| |||| |||||||  | || |||||||| || ||||||||||
Sbjct: 403 tgaatcagcctcctgaagtatggcatggtggtgttggctttgtatcgaaggaaatgattg 344

                                                                       
Query: 713 aaaagcactgccctgcacctgcaccagatgttcagatattaaggtgtgggcctccaccaa 772
           ||||||||||||||||||| ||| | ||| | ||||| || || ||||| || ||||| |
Sbjct: 343 aaaagcactgccctgcaccggcatctgatatccagattttgagatgtggaccaccaccta 284

                                                                       
Query: 773 tgaacaaagccatggctgctcacctagaagctcttgggtacacttcccaaatgcagttcc 832
           ||||||| ||||||||||||||||| |||||||| || ||||| |   | ||||||||||
Sbjct: 283 tgaacaaggccatggctgctcacctcgaagctctcggctacacatttgagatgcagttcc 224

               
Query: 833 agtt 836
           ||||
Sbjct: 223 agtt 220