Jatropha Genome Database

JcCA0153141.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0153141.20 + phase: 0 
         (1047 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524905|gb|FM895603.1|FM895603 FM895603 Jatropha curcas emb...   543   e-154
gi|262091215|gb|GT228642.1|GT228642 JC207 Jatropha seeds from fr...   466   e-131

>gi|268524905|gb|FM895603.1|FM895603 FM895603 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002553,
            mRNA sequence
          Length = 459

 Score =  543 bits (274), Expect = e-154
 Identities = 303/310 (97%), Gaps = 2/310 (0%)
 Strand = Plus / Minus

                                                                        
Query: 740  atggtcacattgctgctcttcagaagctttttacaacagagaatataggttgtgtagcct 799
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459  atggtcacattcctgctcttcagaagctttttacaacagagaatataggttgtgtagcct 400

                                                                        
Query: 800  ataacttgggtacgggacaaggaacgtctgtgcttgaaatggttgctgcatttgagaagg 859
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 399  ataacttgggtacgggacaaggaacgtctgtgcttgatatggttgctgcatttgagaagg 340

                                                                        
Query: 860  cttctggca-agaaaatccccatcaagctgtgtccaagaagacctggagatgccactgct 918
            ||||||||| ||  |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 339  cttctggcatagttaatccccatcaatctgtgtccaagaagacctggagatgccactgct 280

                                                                        
Query: 919  gtgtatgcttccacagagaaagctgagagagaacttggctggaaggcgaaatatggtata 978
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279  gtgtatgcttccacagagaaagctgagagagaacttggctggaaggcgaaatatggtata 220

                                                                        
Query: 979  gcggagatgtgcagagaccaatggaattgggcaagca-acaatccatggggataccaatc 1037
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 219  gcggagatgtgcagagaccaatggaattgggcaagcatacaatccatggggataccaatc 160

                      
Query: 1038 gaagccttga 1047
            ||||||||||
Sbjct: 159  gaagccttga 150


>gi|262091215|gb|GT228642.1|GT228642 JC207 Jatropha seeds from fruits
            at three stages of maturation Jatropha curcas cDNA clone
            PL03SE.C09.scf 5', mRNA sequence
          Length = 359

 Score =  466 bits (235), Expect = e-131
 Identities = 235/235 (100%)
 Strand = Plus / Minus

                                                                        
Query: 813  gggacaaggaacgtctgtgcttgaaatggttgctgcatttgagaaggcttctggcaagaa 872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320  gggacaaggaacgtctgtgcttgaaatggttgctgcatttgagaaggcttctggcaagaa 261

                                                                        
Query: 873  aatccccatcaagctgtgtccaagaagacctggagatgccactgctgtgtatgcttccac 932
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260  aatccccatcaagctgtgtccaagaagacctggagatgccactgctgtgtatgcttccac 201

                                                                        
Query: 933  agagaaagctgagagagaacttggctggaaggcgaaatatggtatagcggagatgtgcag 992
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200  agagaaagctgagagagaacttggctggaaggcgaaatatggtatagcggagatgtgcag 141

                                                                   
Query: 993  agaccaatggaattgggcaagcaacaatccatggggataccaatcgaagccttga 1047
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140  agaccaatggaattgggcaagcaacaatccatggggataccaatcgaagccttga 86