Jatropha Genome Database

JcCA0152621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0152621.10 - phase: 0 /partial
         (474 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521515|gb|FM894267.1|FM894267 FM894267 Jatropha curcas emb...    52   6e-07

>gi|268521515|gb|FM894267.1|FM894267 FM894267 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004575,
           mRNA sequence
          Length = 564

 Score = 52.0 bits (26), Expect = 6e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 309 tggaagtggaagtggaagcggaagcg 334
           ||||||||||||||||||||||||||
Sbjct: 298 tggaagtggaagtggaagcggaagcg 273



 Score = 48.1 bits (24), Expect = 9e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 307 agtggaagtggaagtggaagcggaagcg 334
           |||||||||||||| |||||||||||||
Sbjct: 294 agtggaagtggaagcggaagcggaagcg 267