Jatropha Genome Database

JcCA0152151.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0152151.30 - phase: 0 
         (819 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524561|gb|FM895241.1|FM895241 FM895241 Jatropha curcas emb...   868   0.0  

>gi|268524561|gb|FM895241.1|FM895241 FM895241 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002033,
           mRNA sequence
          Length = 643

 Score =  868 bits (438), Expect = 0.0
 Identities = 441/442 (99%)
 Strand = Plus / Minus

                                                                       
Query: 378 gtctagttacatggaagataaagataactttgcgatatattatgtggtggtgccctgtgc 437
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gtctagttacatggaagataaggataactttgcgatatattatgtggtggtgccctgtgc 584

                                                                       
Query: 438 tattctagccttgtttattcatccatcaacatctcataacttaatcaacaggattttgtg 497
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tattctagccttgtttattcatccatcaacatctcataacttaatcaacaggattttgtg 524

                                                                       
Query: 498 ggcgttttgtgtatatctggaagctgtctctgtactacctcagttgcgagttatgcagaa 557
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggcgttttgtgtatatctggaagctgtctctgtactacctcagttgcgagttatgcagaa 464

                                                                       
Query: 558 tacaaagattgttgaaccatttacagcgcattatgtatttgcattgggtgttgcaaggtt 617
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tacaaagattgttgaaccatttacagcgcattatgtatttgcattgggtgttgcaaggtt 404

                                                                       
Query: 618 cttgagctgtgcccattgggttctccaggttttagatactcgcggacacttgctggtggc 677
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cttgagctgtgcccattgggttctccaggttttagatactcgcggacacttgctggtggc 344

                                                                       
Query: 678 cttgggatatggattatggccatctatggttctcatctcagaaattgtccagactttcat 737
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cttgggatatggattatggccatctatggttctcatctcagaaattgtccagactttcat 284

                                                                       
Query: 738 cttagcagacttctgttattattatgttaaaagtgtttttggaggacagcttgttctccg 797
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cttagcagacttctgttattattatgttaaaagtgtttttggaggacagcttgttctccg 224

                                 
Query: 798 tcttccctcaggagtggtgtga 819
           ||||||||||||||||||||||
Sbjct: 223 tcttccctcaggagtggtgtga 202