Jatropha Genome Database

JcCA0151201.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0151201.20 - phase: 1 /partial
         (683 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680831|gb|GO246982.1|GO246982 JcrME_RL0526 Expressed seque...   640   0.0  

>gi|237680831|gb|GO246982.1|GO246982 JcrME_RL0526 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 631

 Score =  640 bits (323), Expect = 0.0
 Identities = 337/339 (99%), Gaps = 2/339 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaacctagcaaatgctgccgttttcactatccaaaacctctgtagctacactatatggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gaaacctagcaaatgctgccgttttcactatccaaaacctctgtagctacactatatggc 217

                                                                       
Query: 61  cgggaacactctccggaaatggtgccgccattctcggagacggtggttttgcattgccgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cgggaacactctccggaaatggtgccgccattctcggagacggtggttttgcattgccgt 277

                                                                       
Query: 121 ctggcacatcaatccaactccaggctccaccgaattggtccggtaggttttgggctcgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctggcacatcaatccaactccaggctccaccgaattggtccggtaggttttgggctcgaa 337

                                                                       
Query: 181 ctggatgcacatttgatgaatcaggcaatggaaagtgtgtcaccggtgactgtggcgggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctggatgcacatttgatgaatcaggcaatggaaagtgtgtcaccggtgactgtggcgggt 397

                                                                       
Query: 241 tgttaaaatgtactggcggtggagctccgccggttactcttgttgagtttactattgcag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgttaaaatgtactggcggtggagctccgccggttactcttgttgagtttactattgcag 457

                                                  
Query: 301 cgaacgctaatgacaaggatttctacgacgttagccttg 339
           || ||||||||||| ||||||||||||||||||||||||
Sbjct: 458 cg-acgctaatgac-aggatttctacgacgttagccttg 494