Jatropha Genome Database

JcCA0150851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0150851.10 - phase: 1 /pseudo/partial
         (2202 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262090774|gb|GT229132.1|GT229132 JC697 Jatropha seeds from fr...    62   3e-09

>gi|262090774|gb|GT229132.1|GT229132 JC697 Jatropha seeds from fruits
            at three stages of maturation Jatropha curcas cDNA clone
            PL16SE.H03.scf 5', mRNA sequence
          Length = 405

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1615 ggaattttgagggtcgtgtgcatcctttaacaagagctaattatcttgcctcacctccgc 1674
            ||||||||||||||||||| || || || |||||||| || |||||||| || |||||  
Sbjct: 249  ggaattttgagggtcgtgttcaccccttgacaagagcaaactatcttgcttcccctcctt 308

                                           
Query: 1675 ttgtggttgcctatgcacttgctggaacggt 1705
            | ||||| || ||||| |||||||| |||||
Sbjct: 309  tggtggtcgcatatgctcttgctggcacggt 339