Jatropha Genome Database

JcCA0150721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0150721.10 - phase: 0 /partial
         (1222 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525810|gb|FM891065.1|FM891065 FM891065 Jatropha curcas emb...   450   e-126

>gi|268525810|gb|FM891065.1|FM891065 FM891065 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001056,
           mRNA sequence
          Length = 341

 Score =  450 bits (227), Expect = e-126
 Identities = 248/251 (98%), Gaps = 3/251 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaaccgccgctctccgtcacgcaatcgcaatcggcgtgaccgacttccccttgagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  atggaaaccgccgctctccgtcacgcaatcgcaatcggcgtgaccgacttccccttgagt 150

                                                                       
Query: 61  cgctccagacggaggcgagtcaactcgg-tcaatcttatctttcaccg-aacttctcttt 118
           |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 151 cgctccagacggaggcgagtcaactcgggtcaatcttatctttcaccgnaacttctcttt 210

                                                                       
Query: 119 cttcccg-ttttcacctcaaatccatatatcctcctcgcaaatccttcaatccccgttac 177
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 cttcccgnttttcacctcaaatccatatatcctcctcgcaaatccttcaatccccgttac 270

                                                                       
Query: 178 caaacgctccgttgtttggcggaagctaaaaatcaccgagatcatgacctccaccagcac 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 caaacgctccgttgtttggcggaagctaaaaatcaccgagatcatgacctccaccagcac 330

                      
Query: 238 gacgatcaccc 248
           |||||||||||
Sbjct: 331 gacgatcaccc 341