Jatropha Genome Database
- JcCA0150621.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0150621.10 - phase: 1 /pseudo/partial
(923 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237679862|gb|GO247167.1|GO247167 JcrME_RL0711 Expressed seque... 287 1e-77
gi|268519759|gb|FM888226.1|FM888226 FM888226 Jatropha curcas emb... 210 2e-54
gi|237680502|gb|GO246714.1|GO246714 JcrME_RL0258 Expressed seque... 76 8e-14
>gi|237679862|gb|GO247167.1|GO247167 JcrME_RL0711 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 619
Score = 287 bits (145), Expect = 1e-77
Identities = 289/337 (85%)
Strand = Plus / Plus
Query: 312 gttggtcataaaagcaaaaaccaagaagcattgctaagacttattgatgatataattgaa 371
|||||||||||||||||||||||||| || ||| || | |||||||||| ||| ||| |
Sbjct: 14 gttggtcataaaagcaaaaaccaagaggcgttgttagaagttattgatgacatagttgta 73
Query: 372 tcaataggaggtgttggtatagctgatatatttccttccttaaaatggcttccttcagtc 431
||| |||||||| | |||||| |||||| ||||||||| || ||||||||||| | | |
Sbjct: 74 tcaggaggaggtgctagtatagttgatatctttccttccctacaatggcttcctactgcc 133
Query: 432 caaagggaaaggtcttgaattaggaaattgcattatgaaacagatgagatccttgaagat 491
| |||||||| || ||||| |||||||||| | | ||||||||||| || ||||||
Sbjct: 134 aagagggaaagatcaagaatttggaaattgcaccaaaatacagatgagattctcgaagat 193
Query: 492 attttacaagagcatagagctaacaggcaggcagcggcttccaggaatggcgatcagagg 551
|| |||||||||||||||||||| || ||||| | ||||||| |||| | ||| |||
Sbjct: 194 atcttacaagagcatagagctaaaagacaggcgacagcttccaagaattgggataggagc 253
Query: 552 ggagctgataatcttcttgatgttcttttggatcttcaacaaagcggaaatcttgatgtt 611
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 254 gaagctgataatcttcttgatgttcttttggatcttcaacagagcggaaatcttgatgtt 313
Query: 612 cctttaactgatgtcgccatcaaagcagcaatcattg 648
|||||||||||||||||||||||||||||||| ||||
Sbjct: 314 cctttaactgatgtcgccatcaaagcagcaattattg 350
>gi|268519759|gb|FM888226.1|FM888226 FM888226 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001583,
mRNA sequence
Length = 258
Score = 210 bits (106), Expect = 2e-54
Identities = 127/134 (94%)
Strand = Plus / Minus
Query: 789 gcaaacttgctatatcattttgactggaaatttcctaaaggagtaactgcagaaaatctt 848
||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaaactggctatatcatttgtactggaaatttcctaaaggagtaactgcagaaaatctt 182
Query: 849 gacatgaacgaagtttttggaggagctgtcaaaagaaaagtagaccttgaattggttccc 908
|||||||| |||| |||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 181 gacatgaatgaagcttttggaggagctgtcaaaagaaaagtagaccttgaattgatcccc 122
Query: 909 attccattccgtcc 922
||||||||||||||
Sbjct: 121 attccattccgtcc 108
>gi|237680502|gb|GO246714.1|GO246714 JcrME_RL0258 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 700
Score = 75.8 bits (38), Expect = 8e-14
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 723 tttggagcaggaaaaagaatatgccctggaatgactctaggtatggctaatctggagatt 782
||||| || ||||| ||||| |||||||||||||| |||| || | ||||| || ||
Sbjct: 340 tttggtgcgggaaagagaatttgccctggaatgacattagggataacaaatcttgaactt 399
Query: 783 ttcctggcaaacttgctatatcattttgactggaaatttcct 824
||||||||||| ||||||||||||||||| |||||| |||||
Sbjct: 400 ttcctggcaaatttgctatatcattttgattggaaacttcct 441