Jatropha Genome Database

JcCA0149621.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0149621.20 - phase: 2 /partial
         (859 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268523795|gb|FM890481.1|FM890481 FM890481 Jatropha curcas emb...   589   e-168

>gi|268523795|gb|FM890481.1|FM890481 FM890481 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000149,
           mRNA sequence
          Length = 350

 Score =  589 bits (297), Expect = e-168
 Identities = 297/297 (100%)
 Strand = Plus / Minus

                                                                       
Query: 563 gagaaagcaacagattggatattcagcaatcccgatgcttctgtctcatctgatatggat 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gagaaagcaacagattggatattcagcaatcccgatgcttctgtctcatctgatatggat 276

                                                                       
Query: 623 gccaccacatctagtaacttacctaacccggatgatgctggactgcctgatggaggaggg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gccaccacatctagtaacttacctaacccggatgatgctggactgcctgatggaggaggg 216

                                                                       
Query: 683 agatacaggcttttcggaatagtgagccacattggaacctctacgcaatgcgggcattat 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 agatacaggcttttcggaatagtgagccacattggaacctctacgcaatgcgggcattat 156

                                                                       
Query: 743 gttgcgcatgtatttaaagatggcagatggactattttcaacgacaacaaggtcggggct 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gttgcgcatgtatttaaagatggcagatggactattttcaacgacaacaaggtcggggct 96

                                                                    
Query: 803 tctgtaaaccctcccaaagatatggggtatctatacttttttgaaaggcttgacagt 859
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  tctgtaaaccctcccaaagatatggggtatctatacttttttgaaaggcttgacagt 39