Jatropha Genome Database

JcCA0149501.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0149501.20 - phase: 0 /partial
         (318 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517249|gb|FM893597.1|FM893597 FM893597 Jatropha curcas emb...   517   e-147

>gi|268517249|gb|FM893597.1|FM893597 FM893597 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004476,
           mRNA sequence
          Length = 330

 Score =  517 bits (261), Expect = e-147
 Identities = 268/269 (99%), Gaps = 1/269 (0%)
 Strand = Plus / Plus

                                                                       
Query: 45  aagcatcatgcctgaagataaaaagaccaagttcctggaatccgaagattcggagtttga 104
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26  aagcatcatgcctgaagataaaaagaccaagttcctggaatccgaagattcggagtttga 85

                                                                       
Query: 105 aaaagttatagacttctacttatgttctcagagtgatgtgttcgtaccagccatatctgg 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  aaaagttatagacttctacttatgttctcagagtgatgtgttcgtaccagccatatctgg 145

                                                                       
Query: 165 cctattctatgccaatgtagctggtaagagaatagcttctggt-aagacacaaattcttg 223
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 146 cctattctatgccaatgtagctggtaagagaatagcttctggtaaagacacaaattcttg 205

                                                                       
Query: 224 ttccagccaacattccgggaacctctgcgtcggtcaccaatcatttctccccatatatct 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttccagccaacattccgggaacctctgcgtcggtcaccaatcatttctccccatatatct 265

                                        
Query: 284 caaagaagaaccacttggcctattcatgt 312
           |||||||||||||||||||||||||||||
Sbjct: 266 caaagaagaaccacttggcctattcatgt 294