Jatropha Genome Database

JcCA0149021.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0149021.10 - phase: 0 
         (762 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522348|gb|FM894493.1|FM894493 FM894493 Jatropha curcas emb...   230   2e-60

>gi|268522348|gb|FM894493.1|FM894493 FM894493 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000167,
           mRNA sequence
          Length = 136

 Score =  230 bits (116), Expect = 2e-60
 Identities = 132/135 (97%), Gaps = 3/135 (2%)
 Strand = Plus / Minus

                                                                       
Query: 453 gtcacccccattagccccagctctggtacctccatacaagaagcgttg--cttgatcaat 510
           ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||
Sbjct: 136 gtcacccccattagccccagctctggtacctccatacaagaagcgttgggcttgatcaat 77

                                                                       
Query: 511 cctggcatggccactgctagctaccaaatgaccgcgccaccgccagaaccgtacgcgagt 570
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  cctggcatggccactg-tagctaccaaatgaccgcgccaccgccagaaccgtacgcgagt 18

                          
Query: 571 ctcggttaccaaaaa 585
           |||||||||||||||
Sbjct: 17  ctcggttaccaaaaa 3