Jatropha Genome Database
- JcCA0146871.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0146871.10 + phase: 0
(471 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268523068|gb|FM896511.1|FM896511 FM896511 Jatropha curcas emb... 593 e-170
gi|268518962|gb|FM887429.1|FM887429 FM887429 Jatropha curcas emb... 369 e-102
>gi|268523068|gb|FM896511.1|FM896511 FM896511 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003740,
mRNA sequence
Length = 534
Score = 593 bits (299), Expect = e-170
Identities = 341/355 (96%)
Strand = Plus / Plus
Query: 117 tgatttgattgttgatccgcgtaatttggagtggatgagggaggctgattgtcctgttgt 176
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 47 tgatttaattgttgatccgcgtaatttggagtggatgagggatgctgattgtcctgttgt 106
Query: 177 agctgatgtgacacattcactacaacagcctgccgggagaaagttggatggtggtggtgt 236
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 107 ggctgatgtgacacattcactacaacagcctgctgggaaaaagttggatggtggtggtgt 166
Query: 237 tgccagtggaggtcttcgtgaattgataccatgtattgcaaggacagcagttgctgttgg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tgccagtggaggtcttcgtgaattgataccatgtattgcaaggacagcagttgctgttgg 226
Query: 297 ggtagatggaatttttatggaggtgcatgatgatcctttgactgctcctgtggatggtcc 356
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 227 ggtagatggaatttttatggaggtgcatgatgatcctctgagtgctcctgtggatggtcc 286
Query: 357 aacacaatggcctctacgccatttggaagggttacttgaagagctcatggcaatagctag 416
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 287 aacacaatggcctctacgccatttggaggaattacttgaagagctcatggcaatagctag 346
Query: 417 agcaagtaaggggaagagacgtatggacattgatctcacaccatttcgagattag 471
|||||||||||||||| | |||||||||||||||||||||||||||| ||||||
Sbjct: 347 ggcaagtaaggggaagataagtatggacattgatctcacaccatttcgtgattag 401
>gi|268518962|gb|FM887429.1|FM887429 FM887429 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000629,
mRNA sequence
Length = 538
Score = 369 bits (186), Expect = e-102
Identities = 213/222 (95%)
Strand = Plus / Minus
Query: 250 cttcgtgaattgataccatgtattgcaaggacagcagttgctgttggggtagatggaatt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cttcgtgaattgataccatgtattgcaaggacagcagttgctgttggggtagatggaatt 479
Query: 310 tttatggaggtgcatgatgatcctttgactgctcctgtggatggtccaacacaatggcct 369
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 478 tttatggaggtgcatgatgatcctctgagtgctcctgtggatggtccaacacaatggcct 419
Query: 370 ctacgccatttggaagggttacttgaagagctcatggcaatagctagagcaagtaagggg 429
|||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 418 ctacgccatttggaggaattacttgaagagctcatggcaatagctagggcaagtaagggg 359
Query: 430 aagagacgtatggacattgatctcacaccatttcgagattag 471
|||| | |||||||||||||||||||||||||||| ||||||
Sbjct: 358 aagataagtatggacattgatctcacaccatttcgtgattag 317