Jatropha Genome Database
- JcCA0146401.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0146401.10 - phase: 0
(621 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268526447|gb|FM895301.1|FM895301 FM895301 Jatropha curcas emb... 904 0.0
gi|268523784|gb|FM890470.1|FM890470 FM890470 Jatropha curcas emb... 652 0.0
gi|268523482|gb|FM893805.1|FM893805 FM893805 Jatropha curcas emb... 280 2e-75
gi|218687260|gb|GH295721.1|GH295721 JCL170 Jatropha curcas total... 180 1e-45
gi|218687461|gb|GH296115.1|GH296115 JCL564 Jatropha curcas total... 180 1e-45
gi|218687871|gb|GH296360.1|GH296360 JCL810 Jatropha curcas total... 180 1e-45
gi|268526232|gb|FM891488.1|FM891488 FM891488 Jatropha curcas emb... 180 1e-45
gi|268526182|gb|FM891438.1|FM891438 FM891438 Jatropha curcas emb... 107 1e-23
>gi|268526447|gb|FM895301.1|FM895301 FM895301 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002106,
mRNA sequence
Length = 501
Score = 904 bits (456), Expect = 0.0
Identities = 470/477 (98%)
Strand = Plus / Plus
Query: 1 atggtatcgctaaaactacagaagcggctcgccgctagcgttctcaagtgcgggaaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 atggtatcgctaaaactacagaagcggctcgccgctagcgttctcaagtgcgggaaaggc 82
Query: 61 aaggtctggctcgatcctaatgaggtcaatgaaatttccatggccaattccaggcagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 aaggtctggctcgatcctaatgaggtcaatgaaatttccatggccaattccaggcagaac 142
Query: 121 gttagaaagctagtgaaggatggtttcatcattaggaagccaacaaagattcactctcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gttagaaagctagtgaaggatggtttcatcattaggaagccaacaaagattcactctcgt 202
Query: 181 tctcgtgcacgcagaatgaaggaggccaagagaaagggtcgtcactctggatatggtaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tctcgtgcacgcagaatgaaggaggccaagagaaagggtcgtcactctggatatggtaag 262
Query: 241 cgcaagggtaccagggaggctaggctgccaaccaagatcctttggatgaggagaatgcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cgcaagggtaccagggaggctaggctgccaaccaagatcctttggatgaggagaatgcgt 322
Query: 301 gtcctgaggcgtctgctgcgcaaatacagggaatccnnnnnnnttgacaagcacatgtat 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 323 gtcctgaggcgtctgctgcgcaaatacagggaatccaaaaaaattgacaagcacatgtat 382
Query: 361 catgacatgtacatgaaggtaaagggtaatgtattcaagaataaacgtgtgctgatggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 catgacatgtacatgaaggtaaagggtaatgtattcaagaataaacgtgtgctgatggaa 442
Query: 421 agtatccataaatcaaaggctgaaaaggcaagagagaagactttatctgaccaattt 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agtatccataaatcaaaggctgaaaaggcaagagagaagactttatctgaccaattt 499
>gi|268523784|gb|FM890470.1|FM890470 FM890470 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000137,
mRNA sequence
Length = 495
Score = 652 bits (329), Expect = 0.0
Identities = 343/350 (98%)
Strand = Plus / Plus
Query: 272 ccaagatcctttggatgaggagaatgcgtgtcctgaggcgtctgctgcgcaaatacaggg 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ccaagatcctttggatgaggagaatgcgtgtcctgaggcgtctgctgcgcaaatacaggg 64
Query: 332 aatccnnnnnnnttgacaagcacatgtatcatgacatgtacatgaaggtaaagggtaatg 391
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aatccaaaaaaattgacaagcacatgtatcatgacatgtacatgaaggtaaagggtaatg 124
Query: 392 tattcaagaataaacgtgtgctgatggaaagtatccataaatcaaaggctgaaaaggcaa 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tattcaagaataaacgtgtgctgatggaaagtatccataaatcaaaggctgaaaaggcaa 184
Query: 452 gagagaagactttatctgaccaatttgaggctaagcgtgcaaagaacaaggcaagcaggg 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gagagaagactttatctgaccaatttgaggctaagcgtgcaaagaacaaggcaagcaggg 244
Query: 512 agaggaagatagccagaagagaggagcgtttggctcaggggcctggagagaaggcaccac 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agaggaagatagccagaagagaggagcgtttggctcaggggcctggagagaaggcaccac 304
Query: 572 aagcacctgccccacagcagaccgagggagcaaagaaatccaagaagtga 621
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aagcacctgccccacagcagaccgagggagcaaagaaatccaagaagtga 354
>gi|268523482|gb|FM893805.1|FM893805 FM893805 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004731,
mRNA sequence
Length = 626
Score = 280 bits (141), Expect = 2e-75
Identities = 287/338 (84%)
Strand = Plus / Minus
Query: 181 tctcgtgcacgcagaatgaaggaggccaagagaaagggtcgtcactctggatatggtaag 240
||||| ||||| |||||||| | ||||| ||||| || || ||||||||||||||||||
Sbjct: 623 tctcgggcacgttgaatgaagaaagccaaaagaaaagggcgacactctggatatggtaag 564
Query: 241 cgcaagggtaccagggaggctaggctgccaaccaagatcctttggatgaggagaatgcgt 300
||||||||||| || ||||||||||||||||| ||||| || |||||||| || ||||||
Sbjct: 563 cgcaagggtacaagagaggctaggctgccaacaaagattctctggatgagaaggatgcgt 504
Query: 301 gtcctgaggcgtctgctgcgcaaatacagggaatccnnnnnnnttgacaagcacatgtat 360
|| || ||||||||||| ||||| || || ||||| ||||||||||||||||
Sbjct: 503 gttctcaggcgtctgctccgcaagtatagagaatcaaagaagattgacaagcacatgtac 444
Query: 361 catgacatgtacatgaaggtaaagggtaatgtattcaagaataaacgtgtgctgatggaa 420
|||||||||||||||||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 443 catgacatgtacatgaaggtgaagggtaatgtctttaagaacaagcgtgttcttatggaa 384
Query: 421 agtatccataaatcaaaggctgaaaaggcaagagagaagactttatctgaccaatttgag 480
||||| || || ||||||||||| || || |||||||||||| | ||||| || ||||||
Sbjct: 383 agtattcacaagtcaaaggctgagaaagctagagagaagactctgtctgatcagtttgag 324
Query: 481 gctaagcgtgcaaagaacaaggcaagcagggagaggaa 518
|||||| | ||||||||||||||||||||||| |||||
Sbjct: 323 gctaagagggcaaagaacaaggcaagcagggaaaggaa 286
>gi|218687260|gb|GH295721.1|GH295721 JCL170 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 527
Score = 180 bits (91), Expect = 1e-45
Identities = 154/175 (88%)
Strand = Plus / Plus
Query: 344 ttgacaagcacatgtatcatgacatgtacatgaaggtaaagggtaatgtattcaagaata 403
|||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| |
Sbjct: 93 ttgacaagcacatgtaccatgacatgtacatgaaggtgaagggtaatgtctttaagaaca 152
Query: 404 aacgtgtgctgatggaaagtatccataaatcaaaggctgaaaaggcaagagagaagactt 463
| ||||| || ||||||||||| || || ||||||||||| || || ||||||||||||
Sbjct: 153 agcgtgttcttatggaaagtattcacaagtcaaaggctgagaaagctagagagaagactc 212
Query: 464 tatctgaccaatttgaggctaagcgtgcaaagaacaaggcaagcagggagaggaa 518
| ||||| || |||||||||||| | ||||||||||||||||||||||| |||||
Sbjct: 213 tgtctgatcagtttgaggctaagagggcaaagaacaaggcaagcagggaaaggaa 267
>gi|218687461|gb|GH296115.1|GH296115 JCL564 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 527
Score = 180 bits (91), Expect = 1e-45
Identities = 154/175 (88%)
Strand = Plus / Plus
Query: 344 ttgacaagcacatgtatcatgacatgtacatgaaggtaaagggtaatgtattcaagaata 403
|||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| |
Sbjct: 93 ttgacaagcacatgtaccatgacatgtacatgaaggtgaagggtaatgtctttaagaaca 152
Query: 404 aacgtgtgctgatggaaagtatccataaatcaaaggctgaaaaggcaagagagaagactt 463
| ||||| || ||||||||||| || || ||||||||||| || || ||||||||||||
Sbjct: 153 agcgtgttcttatggaaagtattcacaagtcaaaggctgagaaagctagagagaagactc 212
Query: 464 tatctgaccaatttgaggctaagcgtgcaaagaacaaggcaagcagggagaggaa 518
| ||||| || |||||||||||| | ||||||||||||||||||||||| |||||
Sbjct: 213 tgtctgatcagtttgaggctaagagggcaaagaacaaggcaagcagggaaaggaa 267
>gi|218687871|gb|GH296360.1|GH296360 JCL810 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 527
Score = 180 bits (91), Expect = 1e-45
Identities = 154/175 (88%)
Strand = Plus / Plus
Query: 344 ttgacaagcacatgtatcatgacatgtacatgaaggtaaagggtaatgtattcaagaata 403
|||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| |
Sbjct: 93 ttgacaagcacatgtaccatgacatgtacatgaaggtgaagggtaatgtctttaagaaca 152
Query: 404 aacgtgtgctgatggaaagtatccataaatcaaaggctgaaaaggcaagagagaagactt 463
| ||||| || ||||||||||| || || ||||||||||| || || ||||||||||||
Sbjct: 153 agcgtgttcttatggaaagtattcacaagtcaaaggctgagaaagctagagagaagactc 212
Query: 464 tatctgaccaatttgaggctaagcgtgcaaagaacaaggcaagcagggagaggaa 518
| ||||| || |||||||||||| | ||||||||||||||||||||||| |||||
Sbjct: 213 tgtctgatcagtttgaggctaagagggcaaagaacaaggcaagcagggaaaggaa 267
>gi|268526232|gb|FM891488.1|FM891488 FM891488 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001788,
mRNA sequence
Length = 464
Score = 180 bits (91), Expect = 1e-45
Identities = 154/175 (88%)
Strand = Plus / Minus
Query: 344 ttgacaagcacatgtatcatgacatgtacatgaaggtaaagggtaatgtattcaagaata 403
|||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| |
Sbjct: 460 ttgacaagcacatgtaccatgacatgtacatgaaggtgaagggtaatgtctttaagaaca 401
Query: 404 aacgtgtgctgatggaaagtatccataaatcaaaggctgaaaaggcaagagagaagactt 463
| ||||| || ||||||||||| || || ||||||||||| || || ||||||||||||
Sbjct: 400 agcgtgttcttatggaaagtattcacaagtcaaaggctgagaaagctagagagaagactc 341
Query: 464 tatctgaccaatttgaggctaagcgtgcaaagaacaaggcaagcagggagaggaa 518
| ||||| || |||||||||||| | ||||||||||||||||||||||| |||||
Sbjct: 340 tgtctgatcagtttgaggctaagagggcaaagaacaaggcaagcagggaaaggaa 286
>gi|268526182|gb|FM891438.1|FM891438 FM891438 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001727,
mRNA sequence
Length = 431
Score = 107 bits (54), Expect = 1e-23
Identities = 105/122 (86%)
Strand = Plus / Minus
Query: 397 aagaataaacgtgtgctgatggaaagtatccataaatcaaaggctgaaaaggcaagagag 456
||||| || ||||| || ||||||||||| || || ||||||||||| || || ||||||
Sbjct: 413 aagaacaagcgtgttcttatggaaagtattcacaagtcaaaggctgagaaagctagagag 354
Query: 457 aagactttatctgaccaatttgaggctaagcgtgcaaagaacaaggcaagcagggagagg 516
|||||| | ||||| || |||||||||||| | ||||||||||||||||||||||| |||
Sbjct: 353 aagactctgtctgatcagtttgaggctaagagggcaaagaacaaggcaagcagggaaagg 294
Query: 517 aa 518
||
Sbjct: 293 aa 292