Jatropha Genome Database
- JcCA0146281.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0146281.20 + phase: 0
(270 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268517807|gb|FM893182.1|FM893182 FM893182 Jatropha curcas emb... 535 e-153
gi|268523721|gb|FM892254.1|FM892254 FM892254 Jatropha curcas emb... 535 e-153
gi|262091112|gb|GT228539.1|GT228539 JC104 Jatropha seeds from fr... 381 e-106
>gi|268517807|gb|FM893182.1|FM893182 FM893182 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_003914,
mRNA sequence
Length = 697
Score = 535 bits (270), Expect = e-153
Identities = 270/270 (100%)
Strand = Plus / Plus
Query: 1 atggagaataagaacaacaacagcagcagcggcttcatctcatgcgataagcttgatcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggagaataagaacaacaacagcagcagcggcttcatctcatgcgataagcttgatcga 260
Query: 61 gtggccaattgggtgggaagcaacgtggcctccgcattcttcgcctcccttgaacggtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggccaattgggtgggaagcaacgtggcctccgcattcttcgcctcccttgaacggtgc 320
Query: 121 tcctgcatcaacctcaacaccgccgacctcgaagacgaagacgatgaaggggccaaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctgcatcaacctcaacaccgccgacctcgaagacgaagacgatgaaggggccaaggat 380
Query: 181 cgacctcttatgctctgcaagcccactatccgcgacaatcctgaagactatctcgccgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgacctcttatgctctgcaagcccactatccgcgacaatcctgaagactatctcgccgcc 440
Query: 241 gcccaggccggcaccacggctgcccattag 270
||||||||||||||||||||||||||||||
Sbjct: 441 gcccaggccggcaccacggctgcccattag 470
>gi|268523721|gb|FM892254.1|FM892254 FM892254 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_002754,
mRNA sequence
Length = 596
Score = 535 bits (270), Expect = e-153
Identities = 270/270 (100%)
Strand = Plus / Plus
Query: 1 atggagaataagaacaacaacagcagcagcggcttcatctcatgcgataagcttgatcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atggagaataagaacaacaacagcagcagcggcttcatctcatgcgataagcttgatcga 122
Query: 61 gtggccaattgggtgggaagcaacgtggcctccgcattcttcgcctcccttgaacggtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtggccaattgggtgggaagcaacgtggcctccgcattcttcgcctcccttgaacggtgc 182
Query: 121 tcctgcatcaacctcaacaccgccgacctcgaagacgaagacgatgaaggggccaaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcctgcatcaacctcaacaccgccgacctcgaagacgaagacgatgaaggggccaaggat 242
Query: 181 cgacctcttatgctctgcaagcccactatccgcgacaatcctgaagactatctcgccgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cgacctcttatgctctgcaagcccactatccgcgacaatcctgaagactatctcgccgcc 302
Query: 241 gcccaggccggcaccacggctgcccattag 270
||||||||||||||||||||||||||||||
Sbjct: 303 gcccaggccggcaccacggctgcccattag 332
>gi|262091112|gb|GT228539.1|GT228539 JC104 Jatropha seeds from
fruits at three stages of maturation Jatropha curcas
cDNA clone Contig106 5', mRNA sequence
Length = 427
Score = 381 bits (192), Expect = e-106
Identities = 195/196 (99%)
Strand = Plus / Plus
Query: 75 gggaagcaacgtggcctccgcattcttcgcctcccttgaacggtgctcctgcatcaacct 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 gggaagcaacgtggcctccgcattcttcgcctcccttgaacggtgctcctgcatcaacct 93
Query: 135 caacaccgccgacctcgaagacgaagacgatgaaggggccaaggatcgacctcttatgct 194
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 94 caacaccgccgacctcgaagacgaagacgatgaaggggccaaggatcgacctcctatgct 153
Query: 195 ctgcaagcccactatccgcgacaatcctgaagactatctcgccgccgcccaggccggcac 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ctgcaagcccactatccgcgacaatcctgaagactatctcgccgccgcccaggccggcac 213
Query: 255 cacggctgcccattag 270
||||||||||||||||
Sbjct: 214 cacggctgcccattag 229