Jatropha Genome Database

JcCA0144521.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0144521.10 + phase: 2 /pseudo/partial
         (1396 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|238476742|gb|GR209280.1|GR209280 JCST59 Jatropha curcas L. se...   527   e-149

>gi|238476742|gb|GR209280.1|GR209280 JCST59 Jatropha curcas L. seed
            cDNA library Jatropha curcas cDNA 3' similar to Populus
            trichocarpa ABC transporter family protein, mRNA sequence
          Length = 664

 Score =  527 bits (266), Expect = e-149
 Identities = 332/350 (94%), Gaps = 3/350 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1049 acagtggttggtgaacgtgggctgaggttgtccggaggcca-aaaacaaagagtggcaat 1107
            |||||||| ||||||||||  | || ||||||| ||||||  ||||||| | ||||||||
Sbjct: 123  acagtggtgggtgaacgtgatccgaagttgtcctgaggccccaaaacaatgtgtggcaat 182

                                                                        
Query: 1108 tgcaagagcactattgatgaatccaagaat-tttgctattggatgaagccacaagtgctt 1166
            | ||||||||||||||||| |||||||||| |||  ||||||||||||||||||||||||
Sbjct: 183  ttcaagagcactattgatggatccaagaatatttaatattggatgaagccacaagtgctt 242

                                                                        
Query: 1167 tggatgcagagagtgaataccttgttcaggacgccatggattctctgatgaggggcagga 1226
            |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243  tt-atgcagagagtgaataccttgttcaggacgccatggattctctgatgaggggcagga 301

                                                                        
Query: 1227 ctgttcttgttatagcacacaggctttcaactgtcaaaagtgcagatattgttgctgtta 1286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  ctgttcttgttatagcacacaggctttcaactgtcaaaagtgcagatattgttgctgtta 361

                                                                        
Query: 1287 tatctgatggacagatagctgaaagcggcacccacgaagaacttctcagcaaggatggta 1346
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 362  tatctgatggacagatagctgaaagcggcacccacgaagaacttctcagcaatgatggta 421

                                                              
Query: 1347 tttacactgcactagtcaggagacaactacaagaacccaaaactgcaatc 1396
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422  tttacactgcactagtcaggagacaactacaagaacccaaaactgcaatc 471