Jatropha Genome Database
- JcCA0144471.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0144471.10 + phase: 0
(543 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268525326|gb|FM895968.1|FM895968 FM895968 Jatropha curcas emb... 860 0.0
gi|237680642|gb|GO246854.1|GO246854 JcrME_RL0398 Expressed seque... 299 2e-81
>gi|268525326|gb|FM895968.1|FM895968 FM895968 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002981,
mRNA sequence
Length = 549
Score = 860 bits (434), Expect = 0.0
Identities = 434/434 (100%)
Strand = Plus / Plus
Query: 1 atggaggaggagaagcagcagcagccgccgcagggtgcatcatacacatattgggtgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atggaggaggagaagcagcagcagccgccgcagggtgcatcatacacatattgggtgagg 175
Query: 61 gaagcgacggcagatgcggctcctcttcctcttcctaagaaactctctactaatgattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gaagcgacggcagatgcggctcctcttcctcttcctaagaaactctctactaatgattta 235
Query: 121 attacctcacaatctcagccaccaacattgggttccgtctggaatcgggctggaacttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 attacctcacaatctcagccaccaacattgggttccgtctggaatcgggctggaacttgg 295
Query: 181 gaggagaaaaaccttaataaatgggcaactgataggataaaggaacttcttgtgtcagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gaggagaaaaaccttaataaatgggcaactgataggataaaggaacttcttgtgtcagtt 355
Query: 241 ggctccttggagttctcctgtggcaaagctgaaataacagaagtgtcaaaatgtttgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ggctccttggagttctcctgtggcaaagctgaaataacagaagtgtcaaaatgtttgggt 415
Query: 301 gacgcattcttggtgactgtgagaaacaagaaacgagttggctatacttatgagttgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gacgcattcttggtgactgtgagaaacaagaaacgagttggctatacttatgagttgaca 475
Query: 361 ttgaaaatcaaaggggaatggacagtcaaagaggagaaaaagaatgtgaaggcccatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttgaaaatcaaaggggaatggacagtcaaagaggagaaaaagaatgtgaaggcccatata 535
Query: 421 gatatcccagagtt 434
||||||||||||||
Sbjct: 536 gatatcccagagtt 549
>gi|237680642|gb|GO246854.1|GO246854 JcrME_RL0398 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 541
Score = 299 bits (151), Expect = 2e-81
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 312 ggtgactgtgagaaacaagaaacgagttggctatacttatgagttgacattgaaaatcaa 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgactgtgagaaacaagaaacgagttggctatacttatgagttgacattgaaaatcaa 60
Query: 372 aggggaatggacagtcaaagaggagaaaaagaatgtgaaggcccatatagatatcccaga 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggggaatggacagtcaaagaggagaaaaagaatgtgaaggcccatatagatatcccaga 120
Query: 432 gttttcttttggtgagctagatgacttgcag 462
|||||||||||||||||||||||||||||||
Sbjct: 121 gttttcttttggtgagctagatgacttgcag 151