Jatropha Genome Database

JcCA0142891.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0142891.10 - phase: 0 /pseudo
         (911 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262090645|gb|GT229003.1|GT229003 JC568 Jatropha seeds from fr...   335   5e-92

>gi|262090645|gb|GT229003.1|GT229003 JC568 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL12SE.F08.scf 5', mRNA sequence
          Length = 619

 Score =  335 bits (169), Expect = 5e-92
 Identities = 187/192 (97%), Gaps = 2/192 (1%)
 Strand = Plus / Minus

                                                                       
Query: 720 taagctgcaagcaatttgtcagagcttggctacctcacaaaaaacgaggggaaaacagga 779
           |||||||||||||||||||||||||||||||||||||| | ||   ||||||||||||||
Sbjct: 619 taagctgcaagcaatttgtcagagcttggctacctcactataac--aggggaaaacagga 562

                                                                       
Query: 780 gagtcaagttctgtttctgattcgaagaccaatctttcagctccaatgaaggccataaag 839
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagtcaagttctgtttctgattcgaagaccaatctttcagctccaatgaaggccataaag 502

                                                                       
Query: 840 gaagaggattactctttgaaaggtgaactgaaaagggaaattgagaatcttggagctgag 899
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagaggattactctttgaaaggtgaactgaaaagggaaattgagaatcttggagctgag 442

                       
Query: 900 gactatagggtg 911
           ||||||||||||
Sbjct: 441 gactatagggtg 430