Jatropha Genome Database

JcCA0141501.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0141501.10 + phase: 2 /partial
         (311 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680547|gb|GO246698.1|GO246698 JcrME_RL0242 Expressed seque...   458   e-129

>gi|237680547|gb|GO246698.1|GO246698 JcrME_RL0242 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 670

 Score =  458 bits (231), Expect = e-129
 Identities = 234/235 (99%)
 Strand = Plus / Plus

                                                                       
Query: 77  ggtcctgtttcaaaatatatcctaccagatgaaaacctaaggggaagccttactctgacc 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54  ggtcctgtttcaaaatatatcctaccagatgaaaacctaaggggaagccttactctgacc 113

                                                                       
Query: 137 tttgaagaggcgatgtctggagttgcatgtgatcttgagtctcgtggctttcatgtattg 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tttgaagaggcgatgtctggagttgcatgtgatcttgagtctcgtggctttcatgtattg 173

                                                                       
Query: 197 tgtaaggctactgagaaggtagtagggcatgtgaaaccatattcaataactgggagtttg 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tgtaaggctactgagaaggtagtagggcatgtgaaaccatattcaataactgggagtttg 233

                                                                  
Query: 257 ccactgattcgagagttgcaagatgaaggttttgatgttcaaactgctggctatg 311
           |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ccactgattctagagttgcaagatgaaggttttgatgttcaaactgctggctatg 288