Jatropha Genome Database

JcCA0139601.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0139601.10 - phase: 0 
         (186 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from fr...    56   1e-08

>gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL06SE.E07.scf 5', mRNA sequence
          Length = 603

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                       
Query: 73  agaaatggactgttgaagaaagcttatgaattgtcagtcctttgcgatgctgaggttgcc 132
           ||||||||  |||||||||||||||| ||  | || || || ||||||||||| ||||||
Sbjct: 418 agaaatgggttgttgaagaaagcttacgagctttctgttctctgcgatgctgaagttgcc 477

                                   
Query: 133 ctcattgtcttctccagccgtggc 156
           || ||| ||||||| || ||||||
Sbjct: 478 cttattatcttctctagtcgtggc 501