Jatropha Genome Database

JcCA0137431.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0137431.10 - phase: 0 
         (1293 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524166|gb|FM894845.1|FM894845 FM894845 Jatropha curcas emb...   652   0.0  

>gi|268524166|gb|FM894845.1|FM894845 FM894845 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000732,
           mRNA sequence
          Length = 511

 Score =  652 bits (329), Expect = 0.0
 Identities = 329/329 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcacctgcggcgactcaagaagatgatgagataatcaaggacgagaagaatcctcgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atggcacctgcggcgactcaagaagatgatgagataatcaaggacgagaagaatcctcgt 242

                                                                       
Query: 61  cctcttgatgaagacgatattgccctcctcaagacctatggtttaggtccatattcaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cctcttgatgaagacgatattgccctcctcaagacctatggtttaggtccatattcaaac 302

                                                                       
Query: 121 agcattaagaaagaggagaaggaaatcaaggaactggctaagaagatcaatgacctctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agcattaagaaagaggagaaggaaatcaaggaactggctaagaagatcaatgacctctgt 362

                                                                       
Query: 181 ggtatcaaggaatcggacactgggttagctgcaccaagtcagtgggatcttgtttctgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ggtatcaaggaatcggacactgggttagctgcaccaagtcagtgggatcttgtttctgat 422

                                                                       
Query: 241 aagcaaatgatgcaggaggagcaacctcttcaagttgcaaggtgtactaaaatcattaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aagcaaatgatgcaggaggagcaacctcttcaagttgcaaggtgtactaaaatcattaat 482

                                        
Query: 301 ccaaatacggatgatgccaagtatgtcat 329
           |||||||||||||||||||||||||||||
Sbjct: 483 ccaaatacggatgatgccaagtatgtcat 511