Jatropha Genome Database

JcCA0134061.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0134061.10 + phase: 0 /partial
         (929 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237679862|gb|GO247167.1|GO247167 JcrME_RL0711 Expressed seque...   218   9e-57

>gi|237679862|gb|GO247167.1|GO247167 JcrME_RL0711 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 619

 Score =  218 bits (110), Expect = 9e-57
 Identities = 269/322 (83%)
 Strand = Plus / Plus

                                                                       
Query: 574 cataaaagcaaaaatcaagaagcgttgctgaaaattattgatgatatagttgagtcacta 633
           |||||||||||||| ||||| |||||| |  || |||||||||| |||||||  |||  |
Sbjct: 20  cataaaagcaaaaaccaagaggcgttgttagaagttattgatgacatagttgtatcagga 79

                                                                       
Query: 634 ggaggtctcagcacagttgatatctttccttccttaaaatggctaccttcagtcaaaagg 693
           ||||||   || | ||||||||||||||||||| || ||||||| ||| | | ||| |||
Sbjct: 80  ggaggtgctagtatagttgatatctttccttccctacaatggcttcctactgccaagagg 139

                                                                       
Query: 694 gaaaggtcaagaatttggaaattgcattgtgaaacagatgagattcttgaaggtatctta 753
           ||||| ||||||||||||||||||||     | |||||||||||||| |||| |||||||
Sbjct: 140 gaaagatcaagaatttggaaattgcaccaaaatacagatgagattctcgaagatatctta 199

                                                                       
Query: 754 gaagagcataaagcgaacaggcaggcggcagctttcaagaacgacgatgggagccaagct 813
            ||||||||| ||| || || |||||| |||||| ||||||    ||| ||||| |||||
Sbjct: 200 caagagcatagagctaaaagacaggcgacagcttccaagaattgggataggagcgaagct 259

                                                                       
Query: 814 gataatcttcttgatgttcttttggatcttcaacaaaatggaaatcttcaagttccttta 873
           ||||||||||||||||||||||||||||||||||| |  ||||||||| | |||||||||
Sbjct: 260 gataatcttcttgatgttcttttggatcttcaacagagcggaaatcttgatgttccttta 319

                                 
Query: 874 actgacgtcaacatcaaagcag 895
           ||||| |||  |||||||||||
Sbjct: 320 actgatgtcgccatcaaagcag 341