Jatropha Genome Database

JcCA0127751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0127751.10 - phase: 0 /partial
         (498 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517782|gb|FM893157.1|FM893157 FM893157 Jatropha curcas emb...   278   6e-75

>gi|268517782|gb|FM893157.1|FM893157 FM893157 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003944,
           mRNA sequence
          Length = 544

 Score =  278 bits (140), Expect = 6e-75
 Identities = 140/140 (100%)
 Strand = Plus / Plus

                                                                       
Query: 98  gtattaatgattcaacgctgttggatatattgccttacttgaagagcaaaggggttggga 157
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gtattaatgattcaacgctgttggatatattgccttacttgaagagcaaaggggttggga 464

                                                                       
Query: 158 taattagcgcttctccacttgcaatggggcttcttacagagaatggccctccagagtggc 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 taattagcgcttctccacttgcaatggggcttcttacagagaatggccctccagagtggc 524

                               
Query: 218 acccagcttctcctgaacta 237
           ||||||||||||||||||||
Sbjct: 525 acccagcttctcctgaacta 544