Jatropha Genome Database

JcCA0122021.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0122021.20 + phase: 0 /partial
         (290 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525572|gb|FM890827.1|FM890827 FM890827 Jatropha curcas emb...   416   e-117

>gi|268525572|gb|FM890827.1|FM890827 FM890827 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000773,
           mRNA sequence
          Length = 606

 Score =  416 bits (210), Expect = e-117
 Identities = 210/210 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcatttgcaacatctagggttttcaagggttgcagagccctcttagccccagctaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atgtcatttgcaacatctagggttttcaagggttgcagagccctcttagccccagctaag 456

                                                                       
Query: 61  tctgctgccgctgcaaaaacttctagtgcaaaaaccgccgctaccaaggcggcaccagct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tctgctgccgctgcaaaaacttctagtgcaaaaaccgccgctaccaaggcggcaccagct 516

                                                                       
Query: 121 aagcccaagacaaaaccggaaaaaccacttcagcccgctggaatattgaaggtcactcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aagcccaagacaaaaccggaaaaaccacttcagcccgctggaatattgaaggtcactcct 576

                                         
Query: 181 gtctccccagctctccgcgactttctgggt 210
           ||||||||||||||||||||||||||||||
Sbjct: 577 gtctccccagctctccgcgactttctgggt 606