Jatropha Genome Database

JcCA0115811.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0115811.10 - phase: 0 /partial
         (783 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268526215|gb|FM891471.1|FM891471 FM891471 Jatropha curcas emb...   404   e-113

>gi|268526215|gb|FM891471.1|FM891471 FM891471 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001770,
           mRNA sequence
          Length = 508

 Score =  404 bits (204), Expect = e-113
 Identities = 204/204 (100%)
 Strand = Plus / Minus

                                                                       
Query: 580 ctgtgcaaacgaattctacgtcaggtaccaggggagtccttaaagctaaaaaagctgaaa 639
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctgtgcaaacgaattctacgtcaggtaccaggggagtccttaaagctaaaaaagctgaaa 374

                                                                       
Query: 640 gttcttattgaagagcattcatctactgttttttccaatttctcttcaaaaagagatgct 699
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gttcttattgaagagcattcatctactgttttttccaatttctcttcaaaaagagatgct 314

                                                                       
Query: 700 cttactcacctgaaacaaaagttggaaggcagtcagaagttctgtgtagatggaaagaga 759
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cttactcacctgaaacaaaagttggaaggcagtcagaagttctgtgtagatggaaagaga 254

                                   
Query: 760 gtgagtctcatgtgcagaagaggc 783
           ||||||||||||||||||||||||
Sbjct: 253 gtgagtctcatgtgcagaagaggc 230