Jatropha Genome Database
- JcCA0109021.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0109021.10 + phase: 0
(369 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218686908|gb|GH295876.1|GH295876 JCL325 Jatropha curcas total... 724 0.0
gi|218687072|gb|GH296456.1|GH296456 JCL906 Jatropha curcas total... 724 0.0
gi|218687690|gb|GH296270.1|GH296270 JCL719 Jatropha curcas total... 724 0.0
gi|268517950|gb|FM893325.1|FM893325 FM893325 Jatropha curcas emb... 716 0.0
gi|268526255|gb|FM891511.1|FM891511 FM891511 Jatropha curcas emb... 716 0.0
gi|218687029|gb|GH296413.1|GH296413 JCL863 Jatropha curcas total... 541 e-154
gi|218687634|gb|GH296227.1|GH296227 JCL676 Jatropha curcas total... 541 e-154
gi|218687838|gb|GH295833.1|GH295833 JCL282 Jatropha curcas total... 541 e-154
gi|268524502|gb|FM895182.1|FM895182 FM895182 Jatropha curcas emb... 319 1e-87
gi|218686967|gb|GH295935.1|GH295935 JCL384 Jatropha curcas total... 167 1e-41
gi|218687813|gb|GH296328.1|GH296328 JCL778 Jatropha curcas total... 167 1e-41
>gi|218686908|gb|GH295876.1|GH295876 JCL325 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 751
Score = 724 bits (365), Expect = 0.0
Identities = 365/365 (100%)
Strand = Plus / Plus
Query: 1 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 90
Query: 61 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 150
Query: 121 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 210
Query: 181 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 270
Query: 241 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 330
Query: 301 gcctgtggtcttgctggcctttctgctggtatggctattggtattgttggagatgctggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gcctgtggtcttgctggcctttctgctggtatggctattggtattgttggagatgctggc 390
Query: 361 gtcag 365
|||||
Sbjct: 391 gtcag 395
>gi|218687072|gb|GH296456.1|GH296456 JCL906 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 751
Score = 724 bits (365), Expect = 0.0
Identities = 365/365 (100%)
Strand = Plus / Plus
Query: 1 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 90
Query: 61 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 150
Query: 121 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 210
Query: 181 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 270
Query: 241 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 330
Query: 301 gcctgtggtcttgctggcctttctgctggtatggctattggtattgttggagatgctggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gcctgtggtcttgctggcctttctgctggtatggctattggtattgttggagatgctggc 390
Query: 361 gtcag 365
|||||
Sbjct: 391 gtcag 395
>gi|218687690|gb|GH296270.1|GH296270 JCL719 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 751
Score = 724 bits (365), Expect = 0.0
Identities = 365/365 (100%)
Strand = Plus / Plus
Query: 1 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 90
Query: 61 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 150
Query: 121 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 210
Query: 181 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 270
Query: 241 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 330
Query: 301 gcctgtggtcttgctggcctttctgctggtatggctattggtattgttggagatgctggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gcctgtggtcttgctggcctttctgctggtatggctattggtattgttggagatgctggc 390
Query: 361 gtcag 365
|||||
Sbjct: 391 gtcag 395
>gi|268517950|gb|FM893325.1|FM893325 FM893325 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004126,
mRNA sequence
Length = 579
Score = 716 bits (361), Expect = 0.0
Identities = 364/365 (99%)
Strand = Plus / Plus
Query: 1 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 159
Query: 61 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 219
Query: 121 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 279
Query: 181 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 339
Query: 241 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 399
Query: 301 gcctgtggtcttgctggcctttctgctggtatggctattggtattgttggagatgctggc 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 400 gcctgtggtcttgctggcctttctgctggtatggctattggtattgtcggagatgctggc 459
Query: 361 gtcag 365
|||||
Sbjct: 460 gtcag 464
>gi|268526255|gb|FM891511.1|FM891511 FM891511 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001817,
mRNA sequence
Length = 470
Score = 716 bits (361), Expect = 0.0
Identities = 364/365 (99%)
Strand = Plus / Plus
Query: 1 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 114
Query: 61 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 174
Query: 121 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 234
Query: 181 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 294
Query: 241 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 354
Query: 301 gcctgtggtcttgctggcctttctgctggtatggctattggtattgttggagatgctggc 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 355 gcctgtggtcttgctggcctttctgctggtatggctataggtattgttggagatgctggc 414
Query: 361 gtcag 365
|||||
Sbjct: 415 gtcag 419
>gi|218687029|gb|GH296413.1|GH296413 JCL863 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 687
Score = 541 bits (273), Expect = e-154
Identities = 337/357 (94%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 1 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 60
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 78 atggccactggttttagcggcgatgaaaccgctcctttcttcggtttccttggcgccgcg 137
Query: 61 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 197
Query: 121 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 180
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gtagtatcaatggccgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 257
Query: 181 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 240
|||||||||| |||||| ||||| ||| |||||||||||||||||| | ||||||||||
Sbjct: 258 atggctggagcgcttggcatttacggtctgattattgctgttattaccactactggaatt 317
Query: 241 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 300
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 318 aaccctaaagcccaatcatattacctcttcgatggttatgttcatctttcttccggtctg 377
Query: 301 gcctgtggt-cttgctggcctttctgctggtatggctattggtattgttggagatgc 356
||||||||| |||||||| |||||||||| |||||||||| |||||||||||||
Sbjct: 378 gcctgtggtccttgctggtctttctgctgccatggctattgcgtttgttggagatgc 434
>gi|218687634|gb|GH296227.1|GH296227 JCL676 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 687
Score = 541 bits (273), Expect = e-154
Identities = 337/357 (94%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 1 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 60
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 78 atggccactggttttagcggcgatgaaaccgctcctttcttcggtttccttggcgccgcg 137
Query: 61 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 197
Query: 121 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 180
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gtagtatcaatggccgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 257
Query: 181 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 240
|||||||||| |||||| ||||| ||| |||||||||||||||||| | ||||||||||
Sbjct: 258 atggctggagcgcttggcatttacggtctgattattgctgttattaccactactggaatt 317
Query: 241 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 300
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 318 aaccctaaagcccaatcatattacctcttcgatggttatgttcatctttcttccggtctg 377
Query: 301 gcctgtggt-cttgctggcctttctgctggtatggctattggtattgttggagatgc 356
||||||||| |||||||| |||||||||| |||||||||| |||||||||||||
Sbjct: 378 gcctgtggtccttgctggtctttctgctgccatggctattgcgtttgttggagatgc 434
>gi|218687838|gb|GH295833.1|GH295833 JCL282 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 687
Score = 541 bits (273), Expect = e-154
Identities = 337/357 (94%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 1 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 60
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 78 atggccactggttttagcggcgatgaaaccgctcctttcttcggtttccttggcgccgcg 137
Query: 61 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 197
Query: 121 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 180
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gtagtatcaatggccgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 257
Query: 181 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 240
|||||||||| |||||| ||||| ||| |||||||||||||||||| | ||||||||||
Sbjct: 258 atggctggagcgcttggcatttacggtctgattattgctgttattaccactactggaatt 317
Query: 241 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 300
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 318 aaccctaaagcccaatcatattacctcttcgatggttatgttcatctttcttccggtctg 377
Query: 301 gcctgtggt-cttgctggcctttctgctggtatggctattggtattgttggagatgc 356
||||||||| |||||||| |||||||||| |||||||||| |||||||||||||
Sbjct: 378 gcctgtggtccttgctggtctttctgctgccatggctattgcgtttgttggagatgc 434
>gi|268524502|gb|FM895182.1|FM895182 FM895182 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001963,
mRNA sequence
Length = 600
Score = 319 bits (161), Expect = 1e-87
Identities = 296/341 (86%)
Strand = Plus / Plus
Query: 16 agcggcgatgaaaccgctcctttcttcggcttccttggcgccgcggcggccctcgttttc 75
|||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| |||
Sbjct: 65 agcggcgatgaaactgctcctttctttggctttctcggcgccgctgctgccctcgtcttc 124
Query: 76 tcatgtatgggagctgcctatgggacagccaagagcggtgttggtgtagcatcaatgggc 135
|| |||||||||||||| ||||| ||||||||||| || |||||||| |||||||||||
Sbjct: 125 tcctgtatgggagctgcatatggaacagccaagagtggcgttggtgtggcatcaatggga 184
Query: 136 gttatgagaccagagctcgtgatgaaatctatagttcctgttgttatggctggagtgctt 195
|||||||| || ||||| |||||||| ||||| || || |||||||||||||| ||| |
Sbjct: 185 gttatgaggcctgagcttgtgatgaagtctattgtaccagttgttatggctggtgtgttg 244
Query: 196 ggtatttatggtttgattattgctgttattattagtactggaattaaccctaaagccaaa 255
||||| ||||| |||||||||||||||||||| ||||||||||||||||| || || ||
Sbjct: 245 ggtatatatggcttgattattgctgttattatcagtactggaattaaccccaaggctaag 304
Query: 256 tcatattacctcttcgatggttatgctcatctttcttccggtctggcctgtggtcttgct 315
||||||||||| || ||||| ||||| ||||| || || ||||| |||||||| ||||||
Sbjct: 305 tcatattacctttttgatgggtatgcacatctctcatctggtcttgcctgtggccttgct 364
Query: 316 ggcctttctgctggtatggctattggtattgttggagatgc 356
|| ||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 365 gggctttctgctggaatggccattggaattgttggtgatgc 405
>gi|218686967|gb|GH295935.1|GH295935 JCL384 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 577
Score = 167 bits (84), Expect = 1e-41
Identities = 153/176 (86%)
Strand = Plus / Plus
Query: 175 gttgttatggctggagtgcttggtatttatggtttgattattgctgttattattagtact 234
|||||||||||||| ||| | ||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 13 gttgttatggctggtgtgttgggtatatatggcttgattattgctgttattatcagtact 72
Query: 235 ggaattaaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttcc 294
||||||||||| || || || ||||||||||| || ||||| ||||| ||||| || ||
Sbjct: 73 ggaattaaccccaaggctaagtcatattacctttttgatgggtatgcacatctctcatct 132
Query: 295 ggtctggcctgtggtcttgctggcctttctgctggtatggctattggtattgttgg 350
||||| |||||||| |||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 133 ggtcttgcctgtggccttgctgggctttctgctggaatggccattggaattgttgg 188
>gi|218687813|gb|GH296328.1|GH296328 JCL778 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 577
Score = 167 bits (84), Expect = 1e-41
Identities = 153/176 (86%)
Strand = Plus / Plus
Query: 175 gttgttatggctggagtgcttggtatttatggtttgattattgctgttattattagtact 234
|||||||||||||| ||| | ||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 13 gttgttatggctggtgtgttgggtatatatggcttgattattgctgttattatcagtact 72
Query: 235 ggaattaaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttcc 294
||||||||||| || || || ||||||||||| || ||||| ||||| ||||| || ||
Sbjct: 73 ggaattaaccccaaggctaagtcatattacctttttgatgggtatgcacatctctcatct 132
Query: 295 ggtctggcctgtggtcttgctggcctttctgctggtatggctattggtattgttgg 350
||||| |||||||| |||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 133 ggtcttgcctgtggccttgctgggctttctgctggaatggccattggaattgttgg 188