Jatropha Genome Database
- JcCA0101091.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0101091.10 - phase: 2 /partial
(689 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268521641|gb|FM896849.1|FM896849 FM896849 Jatropha curcas emb... 555 e-158
gi|268518705|gb|FM888948.1|FM888948 FM888948 Jatropha curcas emb... 133 3e-31
gi|268525102|gb|FM895744.1|FM895744 FM895744 Jatropha curcas emb... 119 4e-27
gi|262091368|gb|GT228795.1|GT228795 JC360 Jatropha seeds from fr... 92 1e-18
>gi|268521641|gb|FM896849.1|FM896849 FM896849 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004256,
mRNA sequence
Length = 615
Score = 555 bits (280), Expect = e-158
Identities = 287/288 (99%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 403 cctacttctacccact-gatgtggttattgctgacaagtttgctgctgatgctaacagca 461
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cctacttctacccactngatgtggttattgctgacaagtttgctgctgatgctaacagca 64
Query: 462 aggtggtgccagcatccagtattccagatggttggttgggtttggatgttggacctgatt 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aggtggtgccagcatccagtattccagatggttggttgggtttggatgttggacctgatt 124
Query: 522 ccatccagacattctgtgaagctttagatactaccaaaacggttatttggaatggaccaa 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ccatccagacattctgtgaagctttagatactaccaaaacggttatttggaatggaccaa 184
Query: 582 tgggtgtatttgagttcgaaaagtttgcagtgggaactgaggcaattgccaagaagcttg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tgggtgtatttgagttcgaaaagtttgcagtgggaactgaggcaattgccaagaagcttg 244
Query: 642 cagagctcagtggcaagggcgtgacaactatcattggaggtggtgact 689
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cagagctcagtggcaagggcgtgacaactatcattggaggtggtgact 292
>gi|268518705|gb|FM888948.1|FM888948 FM888948 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002475,
mRNA sequence
Length = 490
Score = 133 bits (67), Expect = 3e-31
Identities = 70/71 (98%)
Strand = Plus / Minus
Query: 619 tgaggcaattgccaagaagcttgcagagctcagtggcaagggcgtgacaactatcattgg 678
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaggcaattgccaagaagctttcagagctcagtggcaagggcgtgacaactatcattgg 422
Query: 679 aggtggtgact 689
|||||||||||
Sbjct: 421 aggtggtgact 411
>gi|268525102|gb|FM895744.1|FM895744 FM895744 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002722,
mRNA sequence
Length = 486
Score = 119 bits (60), Expect = 4e-27
Identities = 102/116 (87%)
Strand = Plus / Minus
Query: 569 tggaatggaccaatgggtgtatttgagttcgaaaagtttgcagtgggaactgaggcaatt 628
||||||||||||||||| || ||||| || || ||||||||||| || || ||||| |||
Sbjct: 467 tggaatggaccaatgggagtgtttgaatttgacaagtttgcagttgggacagaggctatt 408
Query: 629 gccaagaagcttgcagagctcagtggcaagggcgtgacaactatcattggaggtgg 684
|| |||||||| |||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 407 gcaaagaagctagcagagctcagtggcaagggagtgacaacaattattggaggtgg 352
>gi|262091368|gb|GT228795.1|GT228795 JC360 Jatropha seeds from
fruits at three stages of maturation Jatropha curcas
cDNA clone PL07SE.B01.scf 5', mRNA sequence
Length = 468
Score = 91.7 bits (46), Expect = 1e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 632 aagaagcttgcagagctcagtggcaagggcgtgacaactatcattggaggtggtgact 689
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 468 aagaagcttccagagctcagtggcaagggcgtgacaactatcattggagccggtgact 411